Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02838 ATGAGTGAGAATCTGATGGGAAGAGTCAACGCTTTGGGGGAGCGTCTCAAAATTGGTGGAGCTGAGGTGGGTCGGAAGATGAGTGCTGGAATGAGTTCTGTGAGTTTCAAAGTCAAAGAATTTTTCCAGGATTCAAGCCATGCTGATAAACTCGTTGGGGAAGCTACCTCTGAGGCCCTTCATCACCCTGACTGGCCCATCATTCTTCATCTCTGTGACTTGATCAATAGTGACCAACTAAACACAGCTGAAGTGGTACGTGCAATAAAGAAACGGGTTGTTTCCAAGAGTCCTGGTAGTCAGTATCTGGCTTTGGTTTTGCTTGATGCATTGGTCAAGAACTGTGACAAGGCTTTCTTGGAGGTGGCAACTGAGAGAGTCCTTGATGAGATGGTCAAGCTCATTGATGACCCTCACACTGTTGTTGATAACCGGAATAAGGCTTTGATGATGATTGAGGCATGGGGCGAGTCAACCATTGAACTTCGCTATCTGCCTGTCTATGCAGAAACTTACAAGAGTTTGAAATCAAGGGGTATTCGATTCCCTAGCCGTGACATCGAAAGTTTGGCTCCTATTTTCACTCCTCCTTGCTCTGGCGCCTCTCCAGAGGCTGATGTCAATCTTGAACATCTTATGCCGAATGACATTCATGTGCAAAGTTTTTCGCCTAGTACTCCTGCTCGTTCTGCCACTACTCCAAAGGCTGATGTCAGTCTTGCACATCTTATGCAGCACGAAGTTCATGTGCAGAGTTTTACCTCTCAACAAACAAAGGAAGCTTTTGATGTTGCGAGAAATAGCATTGAGCTTCTTTCCATTGTATTATCTTCTTCAACGCAACAGGATGTTTTAAAGGATGATTTGATCACCACATTAGTACAACAGTGCCGTCAGTCCCAGACCAATGTCCATAGAATCATTGAGACTGCTTGGGATAATGAAACACTGCTTTTAGAAGCCTTGAATGTAAATGATGAGATTCAGAAGGTTGTCTGCAAATATGAAGAAATGATGAAGAAGAAGAAGCATACAGTTGTTCCACTTGAACCTGAACCGGCTATGGTACCTGTTGCCATAGAACCTGATGAGCCACCCCATTTTACAGAAGAGAAAGCCCTGATTAGAAAGCCTGGTGGTTCAAGAATCGGAGTCCATGGAGGGAGCCAGGATGAATTGTTGGATGATCTTGATGAGATGATATTTGGGAAAAAGGGTAGAGATGGTTTTGATGCGGGACAGTATCCAAAAAAACAACAATCATCTAAAGATGATCTCATCTCCTTCTAA 1290 0.4388 MSENLMGRVNALGERLKIGGAEVGRKMSAGMSSVSFKVKEFFQDSSHADKLVGEATSEALHHPDWPIILHLCDLINSDQLNTAEVVRAIKKRVVSKSPGSQYLALVLLDALVKNCDKAFLEVATERVLDEMVKLIDDPHTVVDNRNKALMMIEAWGESTIELRYLPVYAETYKSLKSRGIRFPSRDIESLAPIFTPPCSGASPEADVNLEHLMPNDIHVQSFSPSTPARSATTPKADVSLAHLMQHEVHVQSFTSQQTKEAFDVARNSIELLSIVLSSSTQQDVLKDDLITTLVQQCRQSQTNVHRIIETAWDNETLLLEALNVNDEIQKVVCKYEEMMKKKKHTVVPLEPEPAMVPVAIEPDEPPHFTEEKALIRKPGGSRIGVHGGSQDELLDDLDEMIFGKKGRDGFDAGQYPKKQQSSKDDLISF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02838 429 Pfam VHS domain 46 179 IPR002014 GO:0035091|GO:0043130
Spst2g02838 429 MobiDBLite consensus disorder prediction 415 429 - -
Spst2g02838 429 SMART VHS_2 48 179 IPR002014 GO:0035091|GO:0043130
Spst2g02838 429 PANTHER TOM1-LIKE PROTEIN 1 1 429 IPR044836 GO:0035091|GO:0043130|GO:0043328
Spst2g02838 429 MobiDBLite consensus disorder prediction 405 429 - -
Spst2g02838 429 ProSiteProfiles GAT domain profile. 253 340 IPR004152 GO:0035091|GO:0043130
Spst2g02838 429 SUPERFAMILY GAT-like domain 180 341 - -
Spst2g02838 429 Gene3D - 250 347 IPR038425 -
Spst2g02838 429 CDD VHS 48 177 - -
Spst2g02838 429 SUPERFAMILY ENTH/VHS domain 44 183 IPR008942 -
Spst2g02838 429 Pfam GAT domain 266 340 IPR004152 GO:0035091|GO:0043130
Spst2g02838 429 ProSiteProfiles VHS domain profile. 55 183 IPR002014 GO:0035091|GO:0043130
Spst2g02838 429 Gene3D - 39 199 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02838 Spst-Chr2 28242675 28244577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02838 - - ccaj:109799203 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02838 2 28242675 28244577 Spst2g02838 2 28242675 28244577 ECH