Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02835 ATGATAGTACTACATAAGGATCAGACACAGCACAAGGATGTCAGATCTAGTCTCACACTGAGTGGCATCTACTTTTTCAAGCTAACGGATTCTGCTGAATCTGTAACCTTTCATAGTTTTTTTAAGATTAGTCTCTGTCCTTCAAATATGTCATCAAAACCATTCAAGCCAAGCCGTTTATCTCATTCTCAGTCAGCAACTTCTGAGGCACCTGACGCCCAGAAGCCTCCTATGCCTCCAACCGTAACTTTTGGGCGAAGAACTTCCTCGGGTCGCTACATCAGCTACTCCAGAGATGATCTTGACAGTGAACTAGGGAGTAGTGACTTCATGAATTACACAGTGCACATGCCTCTGACACCTGATAACCAACCTATGGATCCATCAATTTCACAGAAAGTTGAGGAGCAATATGTGTCAAGTTCCCTTTTCACAGGAGGATTCAACAGTGTTACTCATGCCCATCTAATGGATAAGGTGATAGATTCCGAAGCAAGTCATCCACAGATGGCTGGTGCAAAAGGATCTTCATGTGCAATTCCTGGCTGTGATTGTAAGGTGATGAGTGATGAACGTGGTGTGGATATTCTTCCTTGTGAGTGTGATTTTAAGATATGTAGAGACTGCTATATTGATGTTGTAAAATCAGGAGATGGAATGTGCCCGGGATGCAAAGAGCCTTACAAGAACACAGTGCTAGATGAAGTCGCTGTGGATGATCGAAATGGAAGGCCATTTCCACTTCCTCCCTCAAGTGGAGTGTCTAAAATGGAGAGGAGATTGTCCTTAATGAAGTCAACAAAGTCGGCGTTAATGAGAAGCCAGACTGGAGATTTTGATCACAATCGGTGGCTCTATGAAACAAAGGGTACCTATGGCTATGGCAATGCCATTTGGCCAAAGGGAGGAAATTTTGGAAATGGAAATGGGGATGATGATGATGTTCTTGAGCCAATGGATCTGATGAACAGACCCTGGAGACCACTTACAAGGAAACTCAAGATACCTGCTGCTGTTCTCAGCCCATATCGTCTCATCATTTTCATTCGGTTGGTTGTCTTGGTACTGTTCCTGGCATGGAGGGTGAAGCACAAAAATACTGATGCAATCTGGCTATGGGGCATGTCTGTGGTTTGTGAGATATGGTTTGCCTTTTCTTGGCTTCTGGATCAACTGCCCAAGCTATGCCCGATAAATCGCTCCACAGATCTTAATGTTCTGAAGGAAAAATTTGAAATGCCAAGTCCCAACAATCCTACTGGAAAGTCTGATCTACCGGGGATAGATGTCTTTGTCTCTACTGCTGATCCTGAGAAAGAACCACCTCTTGTCACTGCAAACACCATCTTATCTATCTTAGCCGCAGACTATCCGGTTGAGAAACTTTCTTGCTATGTTTCTGATGATGGGGGTGCACTTCTGACCTTTGAGGCAATGGCTGAAGCTGCCAGTTTTGCTAATGCATGGGTTCCATTCTGCCGTAAGCATGACATAGAGCCTAGGAATCCTGAATCATATTTCAACTTAAAGAGAGATCCCTATAAAAACAAAGTGAAACCAGATTTTGTCAAGGATCGTAGACGGGTGAAACGTGAGTATGATGAGTTCAAGGTCAGGATCAATGGTCTGCCTGACTCTATCCGCCGCCGGTCTGACGCCTTTCATGCAAGAGAGGAATTGAGGGCCATGAAACTGCAGAGACAAAACAAGGTAGATGAACCTGTAGAACCTGTAAAGATTCCAAAAGCCACATGGATGGCTGATGGAACTCATTGGCCAGGGACTTGGTTGAATCCTTCATCTGAGCACTCTAAGGGTGATCACGCGGGAATAATTCAGGTGATGTTGAAACCTCCTAGTGATGAACCTCTTCTTGGAAATGCTGACGATACAAAGCTCATTGACCTGGCTGATGTTGATATCCGTCTCCCCCTTTTGGTTTATGTTTCTAGAGAGAAACGTCCAGGCTATGATCACAACAAAAAAGCCGGGGCCATGAATGCCTTGGTTCGAGCCTCAGCCATCATGTCCAATGGTCCTTTTATACTGAATCTTGACTGTGACCACTACATCTACAACTCCAAGGCAATGAGGGAAGGTATGTGCTTTATGATGGACCGTGGTGGTGACCGCATTTGCTATGTTCAGTTCCCACAAAGATTCGAGGGGATTGACCCTTCTGACAGATATGCCAATCATAACACTGTCTTCTTTGATGTCAACATGAGAGCACTTGACGGACTTCAAGGGCCAGTCTATGTAGGAACCGGTTGCCTTTTTAGAAGGGTCGCGCTTTATGGTTTTGATCCTCCTCGCTCTAAAGAACGCCATCCTGGCTGCTGCAGTTGCTGCTTTGGTAGTAGAAAGAAGAATGCTAACATCTCTGAAGAGAACAGAGCACTGAGGATGGGTGAATCTGATGAAGAAGAAGAAATGAATCTATCAATGTTCCCTAAAAGGTTTGGAAACTCAACTTTCCTCATCGACTCAATCCCAGTGGCAGAGTTCCAAGGAAGGCCACTTGCTGATCACCCTGCAGTGAAGAATGGACGCCCTCCGAGTGCCCTTACCATACCTCGTGAGCTTCTTGATGCATCAACTGTGGCAGAGGCCATCAGTGTGATCTCTTGCTGGTATGAGGACAAGACTGAGTGGGGACAGCGCGTTGGATGGATCTATGGATCAGTTACAGAGGATGTGGTCACTGGATATAGGATGCACAATAGAGGATGGAAATCAGTTTACTGTGTTACCAAGCGTGATGCATTCCGTGGCACTGCTCCCATCAATCTCACTGACAGGCTGCATCAGGTCCTCAGATGGGCAACCGGGTCAGTCGAAATATTCTTCTCAAGAAACAATGCACTTCTGGCTAGCTCAAGAATGAAGTTTCTCCAACGGATTGCATACCTTAATGTTGGAATCTATCCATTCACTTCCTTTTTCCTAATTGTCTACTGCTTCCTTCCAGCACTTTCCCTCTTCTCTGGTCAATTCATTGTTCAAACTCTCAATGTCACTTTCCTTGTTTATCTCTTGACCATCACTGTGACTTTGTGCATGCTGGCGGTGCTTGAAATCAAGTGGTCTGGCATTGAGCTGGAAGAATGGTGGAGAAATGAGCAGTTTTGGTTAATTGGAGGGACAAGTGCACACCTAGCTGCTGTGTTGCAGGGTTTGCTTAAAGTCATAGCAGGGATTGAAATCTCCTTCACATTGACATCAAAATCTGCAGGGGATGATGTGGATGATGAGTTTGCTGATCTATATATTGTGAAGTGGACATCCCTTATGATACCACCAATCACAATTATGATGGTTAACTTGATAGCAATAGCAGTTGGAGTTAGCAGGACCATATACAGTGTCATACCTCAGTGGAGTCGTCTACTAGGTGGTGTTTTCTTCAGTTTTTGGGTCTTGACCCATCTCTACCCCTTTGCAAAAGGTTTGATGGGGAGAAGAGGGAGAACGCCTACCATTGTTTTTGTATGGTCAGGTCTCATAGCAATCACAATATCACTCCTTTGGGTGGCAATCAATCCCCCTGCTGGTACAAACCAAATCGGTGGTTCATTCCAGTTCCCATGA 3591 0.45 MIVLHKDQTQHKDVRSSLTLSGIYFFKLTDSAESVTFHSFFKISLCPSNMSSKPFKPSRLSHSQSATSEAPDAQKPPMPPTVTFGRRTSSGRYISYSRDDLDSELGSSDFMNYTVHMPLTPDNQPMDPSISQKVEEQYVSSSLFTGGFNSVTHAHLMDKVIDSEASHPQMAGAKGSSCAIPGCDCKVMSDERGVDILPCECDFKICRDCYIDVVKSGDGMCPGCKEPYKNTVLDEVAVDDRNGRPFPLPPSSGVSKMERRLSLMKSTKSALMRSQTGDFDHNRWLYETKGTYGYGNAIWPKGGNFGNGNGDDDDVLEPMDLMNRPWRPLTRKLKIPAAVLSPYRLIIFIRLVVLVLFLAWRVKHKNTDAIWLWGMSVVCEIWFAFSWLLDQLPKLCPINRSTDLNVLKEKFEMPSPNNPTGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANAWVPFCRKHDIEPRNPESYFNLKRDPYKNKVKPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAFHAREELRAMKLQRQNKVDEPVEPVKIPKATWMADGTHWPGTWLNPSSEHSKGDHAGIIQVMLKPPSDEPLLGNADDTKLIDLADVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKERHPGCCSCCFGSRKKNANISEENRALRMGESDEEEEMNLSMFPKRFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPSALTIPRELLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRMKFLQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLTITVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDVDDEFADLYIVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSVIPQWSRLLGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQIGGSFQFP 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02835 1196 Pfam Cellulose synthase 428 1187 IPR005150 GO:0016020|GO:0016760|GO:0030244
Spst2g02835 1196 FunFam Cellulose synthase-like protein D3 161 244 - -
Spst2g02835 1196 SUPERFAMILY RING/U-box 166 230 - -
Spst2g02835 1196 Pfam RING/Ubox like zinc-binding domain 180 229 - -
Spst2g02835 1196 MobiDBLite consensus disorder prediction 54 71 - -
Spst2g02835 1196 FunFam cellulose synthase-like protein D3 633 770 - -
Spst2g02835 1196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 161 244 IPR013083 -
Spst2g02835 1196 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 327 1172 - -
Spst2g02835 1196 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 630 769 IPR029044 -
Spst2g02835 1196 MobiDBLite consensus disorder prediction 54 89 - -
Spst2g02835 1196 SUPERFAMILY Nucleotide-diphospho-sugar transferases 443 990 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02835 Spst-Chr2 28227185 28232425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02835 51 1196 Glycosyltransferase AT3G03050 83.609 0.0 2024
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02835 K20924 - gmx:100792604 2147.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02835 2 28227185 28232425 Spst2g02835 2 28227185 28232425 ECH