Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02827 ATGGCATCCGATGCTGAGCAACGCCCTCGTCCCTCTTCTGCAAAGGAAGGAAGTCCATCTGGTGAGATTGGGAGTGCAAGGGAGCCTTTGATTATTGGGGTTCGTGACTCCGAGAGCTATTCTGTCCCTGCTGCAATTCTCCCATTTCTCTTCCCAGCTTTCGGTGGCCTGCTATTTGGCTATGATATTGGTGCCACATCTTCTGCTACCATTTCCATTGAGTCACCGACACTAAGTGGAGTATCTTGGTACAATTTGTCCTCTGTTGAAATTGGTCTTCTTACTAGTGGATCATTATATGGTGCCTTAATTGGCTCCGTGTTGGCCTTCAATGTTGCTGACTTCGTAGGTAGAAGAAGGGAGCTAATTGTATCTGCATTACTATATTTTGTTGGAGCCCTTATAACAGCATTTGCTCCTAATTTTCCTGTATTGGTGCTTGGGAGACTTTTATTTGGCATAGGAATTGGACTGGCAATGCACGCTGCTCCAATGTACATTGCAGAGACAACTCCAACACCAATTCGTGGACAACTAATATCTCTAAAAGAGTTTTTTATCGTACTTGGGATGGTTGCAGGATATGGAATTGGTAGCTTGTTTGTAGAAACTATAGCTGGGTGGCGGTATATGTACGGAGTTAGTAGTCCTGTGGCAATAATCATGGGTCTTGGAATGTGGTGGCTCCCAGCTTCTCCTAGATGGTTACTTTTGCGTGCTATACAGGGAAAAGGGGATGTTCAGAATTCGAAAGACTTAGCAATTTGTAGTTTGCGCCAGCTTCGAGGTCAGGCTTTTGGTGATTCAACTCAGCGGCAAGTTGATGAGATTCTTGCAGAATTTTCTTGTCTCGGTGAAGAAAAAGAAATTACCTTTGGAGAAATATTCCAAGGAAAATGTTTGAAGGCCCTTTGGATTGGTGCAGGATTGGTCTTGTTTCAGCAGATCACAGGGCAACCAAGTGTGCTCTACTATGCTGCATCAATCTTTCAGAGTGCAGGATTCTCTGGAGCATCTGATGCAACCCGAGTCTCTATTCTCCTTGGGGTTTTTAAGTTGATTATGACAGGAATTGCCGTTGTCGTTGTTGATAAACTTGGAAGGAGACCTTTACTACTTGGGGGAGTTTCAGGAATAGTGATCTCTTTATTCCTTCTGGGTTCATATTACGTTTTCTTGGATAATGCACCGGTTGTTGCTGTAGTTGGTCTGCTGTTGTACGTAGGCTGTTACCAGATTTCCTTTGGTCCAATTGGTTGGCTCATGATAGCAGAGATTTTCCCCTTGCGCCTAAGAGGTCGAGGACTTGGTATAGCTGTACTCGTTAATTTTGGTGCAAATGCCCTGGTCACATTTGCTTTTTCCCCACTGAAGGAATTACTTGGAGCAGGAATTTTGTTTTACATCTTTTGTGTAATAGCCGTGGCATCTCTTTCATTCATATACCTTGTTGTACCAGAAACCAAGGGGCTTACACTGGAGGAGATCGAGGCCAAATGCCTCTAA 1506 0.4409 MASDAEQRPRPSSAKEGSPSGEIGSAREPLIIGVRDSESYSVPAAILPFLFPAFGGLLFGYDIGATSSATISIESPTLSGVSWYNLSSVEIGLLTSGSLYGALIGSVLAFNVADFVGRRRELIVSALLYFVGALITAFAPNFPVLVLGRLLFGIGIGLAMHAAPMYIAETTPTPIRGQLISLKEFFIVLGMVAGYGIGSLFVETIAGWRYMYGVSSPVAIIMGLGMWWLPASPRWLLLRAIQGKGDVQNSKDLAICSLRQLRGQAFGDSTQRQVDEILAEFSCLGEEKEITFGEIFQGKCLKALWIGAGLVLFQQITGQPSVLYYAASIFQSAGFSGASDATRVSILLGVFKLIMTGIAVVVVDKLGRRPLLLGGVSGIVISLFLLGSYYVFLDNAPVVAVVGLLLYVGCYQISFGPIGWLMIAEIFPLRLRGRGLGIAVLVNFGANALVTFAFSPLKELLGAGILFYIFCVIAVASLSFIYLVVPETKGLTLEEIEAKCL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02827 501 Gene3D MFS general substrate transporter like domains 38 499 IPR036259 -
Spst2g02827 501 SUPERFAMILY MFS general substrate transporter 49 497 IPR036259 -
Spst2g02827 501 CDD MFS_GLUT10_12_Class3_like 51 496 - -
Spst2g02827 501 ProSitePatterns Sugar transport proteins signature 1. 109 126 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst2g02827 501 MobiDBLite consensus disorder prediction 1 24 - -
Spst2g02827 501 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 44 500 - -
Spst2g02827 501 PRINTS Sugar transporter signature 401 422 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02827 501 PRINTS Sugar transporter signature 314 324 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02827 501 PRINTS Sugar transporter signature 424 436 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02827 501 PRINTS Sugar transporter signature 146 165 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02827 501 PRINTS Sugar transporter signature 56 66 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02827 501 ProSitePatterns Sugar transport proteins signature 2. 151 176 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst2g02827 501 ProSiteProfiles Major facilitator superfamily (MFS) profile. 48 489 IPR020846 GO:0022857
Spst2g02827 501 ProSitePatterns Sugar transport proteins signature 1. 359 375 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst2g02827 501 Pfam Sugar (and other) transporter 51 498 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst2g02827 501 NCBIfam sugar porter family MFS transporter 37 496 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02827 501 FunFam D-xylose-proton symporter-like 3, chloroplastic 41 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02827 Spst-Chr2 28177882 28188542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02827 1 501 Organic Solute Cotransporters AT5G17010 73.956 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02827 - - gmx:100801856 832.017