Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02825 ATGGCCGCCGAGAAGCTCCGGGATTTGAGTCAGCCGATTGATGTTCCCCTCCTGGACGCCACAGTCTCCGCCTTCTATGGCACCGGATCTAAGGAAGAGAGAAATGCTGCTGATCAGATTCTGCGTGACTTGCAAAACAATCCCGATATGTGGCTCCAAGTCATGCATATTTTACAAAATACTCAAAATATGAATACCAAGTTCTTTGCCTTACAGGTTCTAGAAGGTGTAATTAAGTATAGATGGAATGCATTACCTGTTGAGCAGCGAGATGGAATGAAAAATTTCATCTCTGATGTTATTGTACAGCTTTCTAGCAATGATGCTTCATTTCGAGCTGAAAGGTTGTATGTCAACAAACTCAATATTATATTAGTTCAGATTTTGAAGCATGAGTGGCCAGTAAGATGGCGCAGCTTTATTCCTGATCTTGTCTCAGCAGCTAAAACAAGTGAAACTATTTGTGAGAATTGTATGGCTATATTGAAACTTTTGAGTGAAGAGGTTTTTGATTTTTCAAGAGGAGAGATGACGCAGCAGAAGATAAAAGAGCTTAAACAATCATTGAACAGTGAATGTCAACTCATACATGAGTTATGCTTTTATGTGTTATCGGCATCCCAAAGGACTGAACTCATACGTGCGACTCTATCTACATTGCATGCCTTTTTATCATGGATTCCCTTGGGTTATATATTTGAATCACCATTGGTGGCATCCCTTGAATATGGGGGGTATTATGATGTCCAGTATGTCAAGATGTATAACATATTCATGGTCCAATTGCAGAGTATACTCCCACCAACTACCAATATACCAGAGGCATATGCACAGGGTTCAAGTGAGGAACAAGCATTTATACAGAATCTAGCACTTTTCTTCACATCCTTTTATGGGGCAAGTTTCATCTTTTCTGTATATTGTTCTTCAGGTTATTTTATTCACATTCGCATCCTTGAATCCACTCAAGAGAATATAGCTGCTTTGCTGTTGGGCCTTGAATATCTTATCAACATATCTTATGTGGATGATACTGAGGTTTTTAAGGTCTGTTTGGACTACTGGAATTCCTTGGTATCGTGGCTGTTTGAACCACACCGAAGTTTGGACAATCCTGCAGCTTCTGCAACCATGATGGGACTTCAGGTACCAGCAATGCTCCCTGGTATGGTTGATGGACACAATTCTCAGCTTCTTCAGCGCCGGCAGCTGTATGCTGGTCCCATGTCAAAGCTGAGAATGCTTATGATCTGTCGCATGGCAAAGCCTGAAGAGGTTCTCATAGTTGAAGATGAAAATGGGAACATTGTTCGCGAAACCTTGAAGGATAATGATGTGCTTGTCCAGTACAAGATTATGAGAGAGACCCTTATTTATTTGTCGCATCTTGACCATGACGATACTGAAAAGCAGATGCTGAGGAAATTAAGTAAACAGCTTAGTGGTGAGGATTGGACATGGAACAATTTAAATACACTCTGCTGGGCTATAGGTTCTATATCTGGTTCTATGATGGAAGAACAGCCTGTTTGTTCAAAATCAACGTATGTAGTGGGCCAGTATCCAAGGTTTTTAAGAGCTCATTGGAAATTCCTTAAAACTGTTGTGAATAAGTTGTTTGAGTTTATGCATGAGACCCATCCTGGAGTTCAGGATATGGCCTGTGACACATTTCTGAAAATAGTCCAGAAGTGCAAGCGCAAATTTGTGATCACGCAGGTTGGGGAAAATGAACCATTTGTGTCTGAGCTTCTGACAGGCCTTCCCAACACCATTATGGATCTTGAACCCCATCAAATACATTCTTTCTATGAATCTGTTGGTCACATGATTCAGGCAGAGTCTGATGCACAAAAGAGAGATGAATATCTTCAGCGGTTGATGGAGCTCCCAAATCAGAAATGGATGGAAATTATAGGGCAGGCGCATCAAAATGTTGAATTTTTAAAGGATCAGGATGTAATTCGGACAGTGCTTAATATATTGCAGGAAGTTAATAAGGAAGCATCGTGGCAGGCAACGAGTACAAGTGTTGCATGTTCTTTGGGGACATATTTCTTGCCCCAAATCTCGATGATTTTTTTGGACATGTTGAACGTGTACAGAATGTATAGCGAGCTTATTTCAAAAAGTATTACAGAAGGGGGACCTTTTGCATCTAGAACATCCTACGTGAAACTTCTTCGTTCGGTGAAGAGGGAGACACTTAAGCTGATTGAGACATTCTTGGATAAGGCAGAAGACCAACCACAAATTGGTAAACAATTTGTGCCTCCAATGATGGATCCTGTTCTTGGAGATTATGCAAGGAATGTTCCTGACGCAAGGGAATCAGAGAGTGGTGATTTCTTTGCTATTTTAGATATGATCAGCATGTGTCATTCATCTCTCTGTCTCTCTTCCAGATATAAATCTGCAATGATTGAAGATGTACCTCGCATATTTGAAGCTGTCTTTCAGTGCACACTTGAGATGATTACCAAAAATTTCGAAGATTACCCAGAGCATCGCCTCAAGTTCTTCTCTCTACTTCGAGCCATAGCTACTCATTGTTTTCCTGCATTAATCTGCTTGTCAAGTCAGGTTCAATTGAAGCTTGTTATGGACTCTATCATATGGGCTTTTCGACACACTGAAAGAAATATTGCTGAAACTGGGTTGAACCTGTTACTGGAGATGCTTAAGAAGTTTCAGGGCTCAGAGTTCTGCAATCAGTTCTATCGGACATACTTTTTGACAATTGAACAAGAGATATTTGCCGTCTTGACTGATACTTTTCATAAGCCCGGTTTCAAATTACATGTCTTGGTGCTTCAGCATTTGTTCTGTTTGCTGGAAACTGGTGTCCTAACTGAACCTCTTTGGGATGTTGCTACTAGTCCATATCCATACTCGAGTAATTCTGTGTTTGTACGTGAGTTTACCATAAAACTTCTAAGTACTTCATTTCCCAACATGACCACAGCAGAGGTTACTCAATTTGTTAATGGACTCTTTGAGTCTACCAATGATCTATCAACATTTAAAGATCATATACGAGATTTCCTTATTCAGTCCAAAGAATTTTCAGCTCAGGATAACAAAGATCTATATGCTGAAGAGGCTGCGGCTCAGAGAGAGAGAGAACGGCAAAGAATGCTTTCTATTCCAGGGCTTATTGCTCCGAGCGAGTTGCAAGATGAAATGGTGGACTCGTAG 3198 0.4062 MAAEKLRDLSQPIDVPLLDATVSAFYGTGSKEERNAADQILRDLQNNPDMWLQVMHILQNTQNMNTKFFALQVLEGVIKYRWNALPVEQRDGMKNFISDVIVQLSSNDASFRAERLYVNKLNIILVQILKHEWPVRWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNSECQLIHELCFYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESPLVASLEYGGYYDVQYVKMYNIFMVQLQSILPPTTNIPEAYAQGSSEEQAFIQNLALFFTSFYGASFIFSVYCSSGYFIHIRILESTQENIAALLLGLEYLINISYVDDTEVFKVCLDYWNSLVSWLFEPHRSLDNPAASATMMGLQVPAMLPGMVDGHNSQLLQRRQLYAGPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQMLRKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEEQPVCSKSTYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVITQVGENEPFVSELLTGLPNTIMDLEPHQIHSFYESVGHMIQAESDAQKRDEYLQRLMELPNQKWMEIIGQAHQNVEFLKDQDVIRTVLNILQEVNKEASWQATSTSVACSLGTYFLPQISMIFLDMLNVYRMYSELISKSITEGGPFASRTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESESGDFFAILDMISMCHSSLCLSSRYKSAMIEDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQVQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKKFQGSEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLLETGVLTEPLWDVATSPYPYSSNSVFVREFTIKLLSTSFPNMTTAEVTQFVNGLFESTNDLSTFKDHIRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPSELQDEMVDS 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02825 1065 Pfam CRM1 C terminal 689 1023 IPR014877 GO:0005049
Spst2g02825 1065 Gene3D - 244 670 IPR011989 -
Spst2g02825 1065 ProSiteProfiles Importin-beta N-terminal domain profile. 37 103 IPR001494 GO:0006886|GO:0031267
Spst2g02825 1065 Pfam Exportin 1-like protein 115 239 IPR013598 -
Spst2g02825 1065 FunFam protein EXPORTIN 1A 509 1049 - -
Spst2g02825 1065 SMART CRM1_C_2 689 1024 IPR014877 GO:0005049
Spst2g02825 1065 Pfam CRM1 / Exportin repeat 2 401 468 IPR041235 -
Spst2g02825 1065 Pfam CRM1 / Exportin repeat 3 482 508 IPR040485 -
Spst2g02825 1065 Gene3D - 685 1060 IPR011989 -
Spst2g02825 1065 Gene3D - 1 243 IPR011989 -
Spst2g02825 1065 PANTHER EXPORTIN 1/5 4 1063 IPR045065 GO:0005049|GO:0006611
Spst2g02825 1065 Pfam Importin-beta N-terminal domain 37 103 IPR001494 GO:0006886|GO:0031267
Spst2g02825 1065 SUPERFAMILY ARM repeat 21 1014 IPR016024 -
Spst2g02825 1065 Pfam Chromosome region maintenance or exportin repeat 328 363 IPR041123 -
Spst2g02825 1065 SUPERFAMILY ARM repeat 688 1023 IPR016024 -
Spst2g02825 1065 SMART IBN_N_2 37 103 IPR001494 GO:0006886|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02825 Spst-Chr2 28132230 28151846 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02825 K14290 - gmx:100802384 1884.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02825 2 28132230 28151846 Spst2g02825 2 28132230 28151846 ECH