Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02807 ATGGCTTCTCTTCCGCTTCTCCACCACCTCATCCCATCTCTTCCCCTTCCAACATCACACACCACCTTCAACAACACATCAACCACAACTCTCTTCTTCTTTTCCAAAAACAAACCTTCCCTAACCCTCAAATGCTCTTCCACCTCAAAACTGGACCAAGAACAAGAACAAGAAACAATTGAGTTCGAAGCTCCCTTGAGCCAAGTGTGGAGGGAAATCCAAGGCATGAACGATTGGAAAGGGTTGATAGAGCCAACCATGAACCCTCACCTCCGAAGAGAAATAATCCGGTACGGCGAACTCGCACAAGCATGCTACGACTCCTTCGACTTCGACCCTCACTCCAAGTACTGTGGAACATGCAAGTACCACCCTTCACACTTCTTCCACAAACTCAACTTGTCCCACTCCGGCTACTCCATCACCCGCTACCTCTACGCCACCTCCAACATCAACCTCCCCAACTTCTTCCAGAACTCCAACCTCGCCTCCGTCTGGAGCCCACACGCCAACTGGATGGGCTACGTCGCAGTCATCACCGACAAGGAACACGTCAAACGCCTCGGACGCCGCGACATCCTCATTGCATGGCGCGGAACAGTAACCTACCTCGAATGGATCCACGACCTCAAAGACATTCTCCGCCCCGCGTTCTTCTCCAACGACCAAACCATCAAGGTTAAACGTCTTCTTAACTACTACAAAGACGAAGAGGTTAGCATCACCATCACCGGGCACAGTCTCGGCGCTGCCTTGGCCGCTCTGAGCGCCTACGACATAGCTGAGGTGAGGCTAAACGTGGTTGACAACAGTGAACGTGTTCCAGTGACCGTGTTTTCGTTTGCAGGGCCTAGAGTTGGGAATTTGAAGTTTAAAGAGCGGTGTGAGGAGCTTGGGGTGAAGGTGTTGAGAGTGGTGAATGTGCACGATGTGGTGCCCACCGTGCCGGGGATAATAACAAACGAGAAGTTTTTGTTTCAGAAGTACATAGAGGATGCTTTGTCGTTTCCATGGAGTTATGCGCACGTGGGAACGGAGATTGCGTTGGATCATAAGGAGAGTCCGTTTGTGAAGGGGAACAAGGATCTGGTGAGTGCGCATAACTTGGAGGTGCACCTGCACTTGGTGGATGGGTACCATGGGAAGGGGAAGAGATTCTCTTTGGCGTCCAAGAGAGACATAGCACTGGTGAACAAGAGCTGTGATTTTCTGAGGAGTGAGTACGGTGTTCCGCCGCATTGGCGGCAGGATGAGAACAAGGGAATGGTGAGGGACGGAGATGGGCGGTGGATTCTTCCTGAGCGTCCTAGATTGGAGGCTCATCCGCCAGACATGGCTCACCATCTCCAGCAAGTGATAGACAACCACCTTCCATGTCAGCCGCAACAAGAAGAAATCATGTAA 1404 0.5164 MASLPLLHHLIPSLPLPTSHTTFNNTSTTTLFFFSKNKPSLTLKCSSTSKLDQEQEQETIEFEAPLSQVWREIQGMNDWKGLIEPTMNPHLRREIIRYGELAQACYDSFDFDPHSKYCGTCKYHPSHFFHKLNLSHSGYSITRYLYATSNINLPNFFQNSNLASVWSPHANWMGYVAVITDKEHVKRLGRRDILIAWRGTVTYLEWIHDLKDILRPAFFSNDQTIKVKRLLNYYKDEEVSITITGHSLGAALAALSAYDIAEVRLNVVDNSERVPVTVFSFAGPRVGNLKFKERCEELGVKVLRVVNVHDVVPTVPGIITNEKFLFQKYIEDALSFPWSYAHVGTEIALDHKESPFVKGNKDLVSAHNLEVHLHLVDGYHGKGKRFSLASKRDIALVNKSCDFLRSEYGVPPHWRQDENKGMVRDGDGRWILPERPRLEAHPPDMAHHLQQVIDNHLPCQPQQEEIM 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02807 467 Gene3D alpha/beta hydrolase 69 444 IPR029058 -
Spst2g02807 467 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 226 436 - -
Spst2g02807 467 Pfam Lipase (class 3) 226 318 IPR002921 GO:0006629
Spst2g02807 467 SUPERFAMILY alpha/beta-Hydrolases 94 355 IPR029058 -
Spst2g02807 467 CDD Lipase_3 126 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02807 Spst-Chr2 27948642 27950135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02807 66 453 Acyl Lipid Metabolism Gene Families AT1G51440 68.065 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02807 - - gmx:100795661 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02807 2 27948642 27950135 Spst2g02807 2 27948642 27950135 ECH