Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02795 ATGGACGACGTTTGCGAAGGGAAAGACTTCACGTTCCCGAAGCAGGAGGAGAAGATTCTAGAACTCTGGTCTCAAATCGACGCATTCCACACTCAGTTAGCTCTCACCAAGGACAAGCCCGAGTACATCTTCTACGATGGCCCTCCCTTCGCCACTGGCCTCCCTCACTATGGCCATATCCTTGCCGGTACCATCAAGGACATCGTCACGCGCTACCACTCCATGACCGGCCACCACGTCACGCGCCGCTTCGGCTGGGACTGCCACGGCCTCCCCGTCGAGAACGAGATCGACAAGAAGCTCGGCATTAAGAAGCGCGAGGATGTCCTCAAGCTCGGAATCGGCAAGTACAACGAGGAGTGCCGCAGCATCGTCACGCGCTACGTCTCCGAGTGGGAGACAGTCATCACGCGCACTGGCCGCTGGATTGACTTCAAGAATGATTATAAGACAATGGACCTCAAGTTCATGGAGTCAGTGTGGTGGGTTTTCGCTCAGTTGTACGCTAAAAACCTTGTCTATAAAGGTTTCAAGGTCATGCCATACAGCACTGGCTGCAAAACTCCGCTCTCGAATTTCGAGGCTGGGCAGAATTATAAGGATGTATCTGATCCTGAAGTATTCATGACTTTTCCAGTCCTGGGTGATCCACATGGCGCATCTTTTGTAGCATGGACAACGACTCCATGGACTCTTCCTAGCAATCTTGCTCTGTGTATCAATGGCAATTTTACCTATGTGAAGGTTCGCAATAAGTACTCTGGTAAAGTTTATATTGTTGCTGAATCTCGTCTATCTGCAATCCATAACCCGAAGGAGAAACCCAAAGAGGCAGTTGTTAATAGTTCAAATGATGTTTCTAAGAATAAAAATACAAAGACCAAGGGAGCTTCAGGAGGAAAAACGGAAAATGTTTTAGATTCATTTGAAGTGCTGGAGAAATTTTCAGGGGATTCATTAGTGGGGACAAAGTATGAACCATTATTTGATTACTTTAAGGAGTTATCTGATACAGCTTTTAGGGTTGTTGCCGACAATTATGTTACTGATGATAGTGGTACTGGTGTTGTCCATTGTGCCCCCGCTTTTGGTGAAGATGATTTCCGTGTTTGCATTGATAATAAAATCCTTAGCAAGGATAATCTAACTGTAGCTGTTGATGACGATGGCTGCTTTACTGAAAAAATTACTGACTTTAGTGGGTGCTACATCAAACAAGCTGACAAAGATATCATTGAAGCTGTGAAGGCAAAGGGTAGACTGCTTAAATCTGGAGCTTTTACACATTCTTATCCATACTGCTGGAGATCTGATACCCCTCTCATTTACAGAGCTGTTCCAAGCTGGTTTGTTAGAGTGGAATTGTTGAAAGATCAATTGTTGGAAAACAATAAGCAGACCTACTGGGTTCCTGATTTTGTCAAGGATAAGCGATTTCACAATTGGCTGGAAAATGCAAGAGATTGGGCAATTAGTCGTAGTAGATTTTGGGGAACCCCTCTCCCTCTATGGATTAGTGAGGATGAGAAGGAAATAGTTGTCATAGATTCTGTTGCAAAACTTGAAAAGCTTGCAGGTGTAAAGTTTGGTGATGTGCAGGATGTGATTTTGTATCTTTATCCAACTATTTTCATTACAATGGTGTCTGATCTTCACCGTCACAACATAGATCATATTACAATTAAATCTGACAGTGGCCGTGTACTTCGACGTGTTGATGATGTGTTTGACTGCTGGTTTGAGAGTGGATCCATGCCATATGCATATATCCATTATCCTTTTGAAAATGTTGAGCTGTTTGAGAAGAATTTTCCTGGCCATTTTGTTGCCGAAGGGCTGGATCAAACACGTGGTTGGTTTTATACCCTTATGGTTCTGGCTACTGCATTATTTGGCAAGCCTGCGTTTAGGAATCTAATCTGCAATGGACTTGTCCTTGCTGAAGATGGGAAAAAGATGAGTAAAAGCTTGAAAAATTATCCTTCACCAATGGAAGTTATTAATGATTATGGAGCGGATGCCTTGCGATTGTACCTTATCAACTCTCCAGTTGTGCGTGCGGAGCCACTTCGATTCAAGAAGGAAGGGGTTTATGGTGTTGTTAGGGATGTCTTCCTTCCTTGGTATAATGCATACAGGTTCCTTGTTCAAAATGCAAAGAGGCTGGAAGTTGAAGGTCTAGCACCTTTTGTCCCCCTTGATCAGGCCACACTTCTGAAGTCATCAAATGTTCTTGATCAATGGATTAACTCAGCCACCCAAAGCCTTATACATTTTGTCCGACAGGAAATGGATGGGTACCGCCTTTACACGGTGGTTCCTTATCTTCTGAAGTTTCTTGATAACCTTACAAATATTTATGTAAGGTTCAACCGAAAGAGACTTAAAGGTCGTTCTGGGGAAGAAGACTGCAGGATATCACTATCAACTCTTTACAATGTGCTTTTGTTATCCTGTAAAGTGATGGCTCCTTTTACACCTTTCTTCACTGAGGTGCTCTATCAAAATATGCGAAAAGTTTATAATGGATTAGAGGAAAGCATACACTATTGTAGTTTTCCTGCAGAAGAAGGAAAGAGGGGAGAACGAATTGAGCAGAGCGTTTCAAGGATGATGATAATAATTGATCTGGCCAGAAACATTCGTGAACGGCACAACAAGCCTCTTAAGACTCCACTAAGGGAGATGGTTATAGTTCATCCGGATGCAGACTTCCTTGATGACATAAATGGAAAATTGAAGGAGTATGTGCTGGAGGAACTCAATGTGCGATCCCTTGTTCCATGTAATGATACTTTAAAATATGCATCTTTACGTGCTGAGCCTGAATTTAGTGTTTTAGGTAAGAGACTAGGGAAATCAATGGGTATTGTTGCCAAAGAAGTCAAAGCAATGTCACAGGAAAATATTTTGGCTTTTGAGAATGCTGGTGAAGTCACCATTGCAAATCACTGTTTGAAGCTGACTGATATTAAGGTTCTCCGTGATTTTAAACGACCTGATGGTATGACTGAGAACGAGGTTGATGCTGCAGGAGACGGTGATGTTCTAGTCATATTGGACTTGCGTCCTGATGAGTCATTGTTTGAGGCTGGTGCTGCCCGAGAGATTGTTAATAGGATTCAGAAGTTACGGAAGAAAGTTGCTCTTGAACCTACTGACATGGTGGAGGTTTACTTTGAATCATTAGATGGTGACAAATCAGTTTCTCAAAGAGTTTTGCACTCACAGGAATCCTACATCAGGGATGCTATTGGTTCTCCGTTGCTTCCAAATTCTCTGATGCCTGTACATGCAGTTGTACTTGGCGAAGAGAGGTTCCATGGGATAGCCGGCATGTCATTTGGTATCACTTTGACGAGACCTGCATTGATGTTTAACACAAAAGCCATTCTTTTACTGTTTACAGGTGATGCAAGAAGTGCACATAATTTGCAAACTTACCTGCTATCAAGAGATCATTCGAAGTTGAAGTCCGAGTTTCAAGATGGAAATAGAAAGAAAATTATTGATTCAATTGAACAGCTACCTGCTGTGGACGTGGTTCTTGGTGAGCATGTTTTTCTCACTGTGGGGGACTATAACCTTGCTGGAAAATCTTGA 3603 0.4277 MDDVCEGKDFTFPKQEEKILELWSQIDAFHTQLALTKDKPEYIFYDGPPFATGLPHYGHILAGTIKDIVTRYHSMTGHHVTRRFGWDCHGLPVENEIDKKLGIKKREDVLKLGIGKYNEECRSIVTRYVSEWETVITRTGRWIDFKNDYKTMDLKFMESVWWVFAQLYAKNLVYKGFKVMPYSTGCKTPLSNFEAGQNYKDVSDPEVFMTFPVLGDPHGASFVAWTTTPWTLPSNLALCINGNFTYVKVRNKYSGKVYIVAESRLSAIHNPKEKPKEAVVNSSNDVSKNKNTKTKGASGGKTENVLDSFEVLEKFSGDSLVGTKYEPLFDYFKELSDTAFRVVADNYVTDDSGTGVVHCAPAFGEDDFRVCIDNKILSKDNLTVAVDDDGCFTEKITDFSGCYIKQADKDIIEAVKAKGRLLKSGAFTHSYPYCWRSDTPLIYRAVPSWFVRVELLKDQLLENNKQTYWVPDFVKDKRFHNWLENARDWAISRSRFWGTPLPLWISEDEKEIVVIDSVAKLEKLAGVKFGDVQDVILYLYPTIFITMVSDLHRHNIDHITIKSDSGRVLRRVDDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTRGWFYTLMVLATALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPMEVINDYGADALRLYLINSPVVRAEPLRFKKEGVYGVVRDVFLPWYNAYRFLVQNAKRLEVEGLAPFVPLDQATLLKSSNVLDQWINSATQSLIHFVRQEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRSGEEDCRISLSTLYNVLLLSCKVMAPFTPFFTEVLYQNMRKVYNGLEESIHYCSFPAEEGKRGERIEQSVSRMMIIIDLARNIRERHNKPLKTPLREMVIVHPDADFLDDINGKLKEYVLEELNVRSLVPCNDTLKYASLRAEPEFSVLGKRLGKSMGIVAKEVKAMSQENILAFENAGEVTIANHCLKLTDIKVLRDFKRPDGMTENEVDAAGDGDVLVILDLRPDESLFEAGAAREIVNRIQKLRKKVALEPTDMVEVYFESLDGDKSVSQRVLHSQESYIRDAIGSPLLPNSLMPVHAVVLGEERFHGIAGMSFGITLTRPALMFNTKAILLLFTGDARSAHNLQTYLLSRDHSKLKSEFQDGNRKKIIDSIEQLPAVDVVLGEHVFLTVGDYNLAGKS 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02795 1200 FunFam Isoleucyl-tRNA synthetase, cytoplasmic 400 690 - -
Spst2g02795 1200 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 201 431 IPR009008 GO:0002161|GO:0006418
Spst2g02795 1200 SUPERFAMILY Nucleotidylyl transferase 10 702 - -
Spst2g02795 1200 Hamap Isoleucine--tRNA ligase [ileS]. 2 1098 IPR023586 GO:0004822
Spst2g02795 1200 FunFam Isoleucyl-tRNA synthetase,cytoplasmic 4 210 - -
Spst2g02795 1200 Gene3D - 694 886 - -
Spst2g02795 1200 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 707 955 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Spst2g02795 1200 Gene3D HUPs 4 209 IPR014729 -
Spst2g02795 1200 Gene3D HUPs 401 689 IPR014729 -
Spst2g02795 1200 PRINTS Isoleucyl-tRNA synthetase signature 571 584 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Spst2g02795 1200 PRINTS Isoleucyl-tRNA synthetase signature 42 53 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Spst2g02795 1200 PRINTS Isoleucyl-tRNA synthetase signature 223 246 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Spst2g02795 1200 PRINTS Isoleucyl-tRNA synthetase signature 611 620 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Spst2g02795 1200 CDD IleRS_core 398 692 - -
Spst2g02795 1200 FunFam Isoleucine--tRNA ligase cytoplasmic 694 886 - -
Spst2g02795 1200 Pfam Anticodon-binding domain of tRNA ligase 746 895 IPR013155 GO:0004812|GO:0006418
Spst2g02795 1200 Pfam tRNA synthetases class I (I, L, M and V) 307 688 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Spst2g02795 1200 Pfam tRNA synthetases class I (I, L, M and V) 18 274 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Spst2g02795 1200 MobiDBLite consensus disorder prediction 280 299 - -
Spst2g02795 1200 PANTHER SOLEUCYL-TRNA SYNTHETASE 1 1116 IPR023586 GO:0004822
Spst2g02795 1200 Pfam Domain of unknown function (DUF5915) 915 1082 - -
Spst2g02795 1200 CDD Anticodon_Ia_Ile_ABEc 692 879 IPR033709 GO:0000049
Spst2g02795 1200 MobiDBLite consensus disorder prediction 272 299 - -
Spst2g02795 1200 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 49 60 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02795 Spst-Chr2 27830871 27847053 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02795 K01870 - gmx:100791830 2240.69