Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02757 ATGAACACGCTCCTCCGATCCACGCTCAGGACTAAGGCACTGAATGTTGCATCTCTAGCATATGCTGCGGTTTCCAGAAGTGTTCAGGAAAATCTCCTTCATGTTCCCTTGCGGTCTAGATCAAATAGCACGGAGTCTTCCTTGGCAGAGGATAATTCAACTAATGAAGTCAAAAGTGGTTCAGGGTTCAAAGGCCACGCTATGCTTGCCCCTTTCACGGCTGGGTGGCAGACTACTGATCTGAATCCTCTCGTTATAGAAAAGTCAGAGGGAAGCTATGTATATGACACTAATGGGAAGAAATATCTTGATGCACTTGCTGGTCTATGGGCCACTGCTTTAGGGGGAAATGAGCCACGCCTTGTTGAGGCTGCCATCACACAATTAAAGAAGTTGCCATTTTACCATTCCTTTTGGAATCGGACCACCATACCTTCTCTGGAACTAGCCAAGGAACTCCAAGAAATGTTCACAGCCAGAAAAATGGCAAAAGCTTTTTTTGTTAATAGTGGATCAGAAGCCAATGACACTCAGGTGAAACTTGTATGGTATTATAACAATGCGCTTGGAAGACCAGATAAGAAGAAATTCATAGCTCGTGCAAAATCGTATCACGGTTCCACGTTGATAGCAGCCAGTCTTTCCGGCCTTCCGGCTCTGCATCAGAAATTTGATTTGCCAGCACCTTTCGTATTGCATACTGACTGTCCCCATTACTGGCGGTATCATCTTCCAGGTGAGACAGAGGAAGAATTTTCAACCAGATTGGCCAACAATTTAGAGCAGCTGATTCTGAAAGAGGGACCAGAGACAATTGCTGCATTTATTGCCGAACCTGTAATGGGGGCAGGAGGTGTAATACCTCCACCATCTGGTTATTTTGAAAAGATCCAAGCTGTTGTCAAGAAGTATGACATTCTTTTTATTGCCGATGAGGTAATATGTGCCTTTGGAAGGCTTGGGACAATGTTTGGATGTGACAAGTACAATATTAAGCCGGACCTTGTATCCCTGGCCAAGGCATTGTCTTCTGCATATTTGCCCATTGGAGCTGTCCTTGTATGCCCAGAAGTTTCAGAAGTTATACACTCACAAAGTAACAAACTTGGTTCATTTTCTCATGGGTTTACTTATTCTGGACACCCCGTAGCCTGTGCTGTTGCAATTGAAACACTCAAGATTTATAAGGAAAGAAATATTGTTGACGAGGTGAACAAGATCGCCCCCAGGTTCCAAGATGGCATAAAAGCTTTTTCTGATAGTCCCATCATTGGAGAGATACGGGGAACTGGCTTGATTCTGGGCACTGAGTTCGTAGACAACAAGTCACCTAATGATCCGTTTCCTCCTGAATGGGGAGTGGGTGCCTATTTTGGAGCACAATGTGAGAAACATGGAATGTTAGTTCGTATAGCGGGGGATAACATCATGATGTCTCCACCATTTATTATATCTCCAGGAGAAGTTGACGAGTTAATCAATATTTATGGGAAAGCTTTGAAAGAAACGGAAAAGAAGGTACAGGAGCTCAAGTCTCAGCGCAAGTAG 1548 0.4406 MNTLLRSTLRTKALNVASLAYAAVSRSVQENLLHVPLRSRSNSTESSLAEDNSTNEVKSGSGFKGHAMLAPFTAGWQTTDLNPLVIEKSEGSYVYDTNGKKYLDALAGLWATALGGNEPRLVEAAITQLKKLPFYHSFWNRTTIPSLELAKELQEMFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLANNLEQLILKEGPETIAAFIAEPVMGAGGVIPPPSGYFEKIQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYLPIGAVLVCPEVSEVIHSQSNKLGSFSHGFTYSGHPVACAVAIETLKIYKERNIVDEVNKIAPRFQDGIKAFSDSPIIGEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRIAGDNIMMSPPFIISPGEVDELINIYGKALKETEKKVQELKSQRK 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02757 515 Coils Coil 493 513 - -
Spst2g02757 515 MobiDBLite consensus disorder prediction 39 60 - -
Spst2g02757 515 CDD OAT_like 78 500 IPR005814 GO:0008483|GO:0030170
Spst2g02757 515 Gene3D Aspartate Aminotransferase, domain 1 84 500 IPR015422 GO:0003824
Spst2g02757 515 Gene3D - 118 400 IPR015421 GO:0003824
Spst2g02757 515 SUPERFAMILY PLP-dependent transferases 68 502 IPR015424 -
Spst2g02757 515 FunFam Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, probable 118 398 - -
Spst2g02757 515 Pfam Aminotransferase class-III 83 500 IPR005814 GO:0008483|GO:0030170
Spst2g02757 515 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 308 345 IPR005814 GO:0008483|GO:0030170
Spst2g02757 515 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 45 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02757 Spst-Chr2 27345954 27351972 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02757 K16871 - gmx:100815181 947.192