Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02744 ATGGGGAGTGTTTCGTCCGAAGATGGTTCCGACCAGCAGAGCGACCGCTGCGGAAGCTACAGTCTCAGTGCTGACGTCAGCGAGTCCGAGAGCTGCGGTAGCTTCTCCGCGCGCCGTTTCCACGCCGACGGAGCTTCCACCTCCGCCAACCTCTCGCCGCGTCCCGTCAGCGCTCACTTCAACTTCCCGCCGGCGCAGGTAATGCTTCCCGTCATTGGCGGTAAGGACGTCGTCGTTTGGGATCACAAGCGCGACCTCGATCTGTCCGAGCGATTGCGTTTTGCAGAAGTTGAAATGATGAAGGAGCGGTTCGCTAAGCTGCTTCTCGGAGAAGACATGTCTGGTGGTGGTAAGGGGGTGTGCACTGCGCTTGCAATCTCTAATGCAATAACTAATCTCTCTGCAACTGTGTTTGGTGAACTTTGGAGGTTGGAGCCGCTGGCACCACAGAAGAAGGCAATGTGGCGTAGGGAAATGGAATGGCTGCTATGTGTGAGTGATTCCATCGTGGAACTGGTGCCATCTGTGCAGCAATTTCCTGGGGGTGGAACCTATGAGGTGATGGCCACGCGTCCTCGCTCGGATTTGTACATCAATCTTCCGGCTCTGAAGAAACTTGATGGGATGCTGCTTAGTATGCTTGATGGGTTTCACGACACGCAATTTTGGTATGTTGACCGGGGAATCATATTGGATGATTCCAAGGATTGTGATGCCTATGGTAGACCATCGGTTAGGCAAGAGGAGAAATGGTGGCTTCCCTCTCCCAAGCTACCCCCAAATGGCTTGTCCGAGGAAAATAGGAAAAGGTTGCAGCAATGTAGGGATTGTACCAATCAGATACTGAAAGCTGCTGTGGCAATTAATACTTTTGTGATTGCTGAAATGGAAATTCCCGGCGCATATGTAGAGTCCTTGCCCAAGAATGGAAAGGCTTGTTTAGGGGATATAATTTATCGATACATAACGGCAGACCAGTTTTCACCTGAATGTCTCCTTGATTGCCTGGATCTTTCGTCAGAGCACCACACTCTGGATATAGCTAATAGAATTGAGGCTGCAATACATGTATGGAGGCTGAAGGACCATAAGAAACATCTAAGTTCAGCCAAAGCTAGACGGTCTTGGGGTGGAAAGGTGAAGGGACTTGTTGCTGACAGTGAAAAGAACAAGAATCATTTTCTTGCCCAAAGGGCAGAGACGCTTCTAGAAAGCTTGAAACATCGATTTCCTGGCCTCCCTCAGACTGCACTAGATATGGCCAAAATTCAATATAATAAGGATGTTGGACAGTCTATTCTTGAAAGTTATTCAAGAGTGATGGAGAGCTTGGCCTTCAACATAATGGCGAGGATTGATGATGTCCTTTATGTAGATGATAGTATAAAGCGATGTGCAGCTGCAGATTCTCTCTCATTGTTCAGCAGGGGAGGTTTCGGTGGGATGCCCATCCAGAAGCGATTCTCTCCTAGTCCCTTCTCAATTCAACACACCCCATATGCCTCCCCATTTGCAACACCATCGTTTTGCTCCTCCTCTCCTGTTACTGGGAGCCCTTGCAGTCCTGCAAGGATACATGATATGAAGAGAAATGCTCCAAAGGAGGGGGCAGATTCGAAGCAAGACAATTTGGCCAAATCTGAGTTTGAGAGAGTTTGGTCATATGCCGGAAACCTGAGTTCAAGAAGAGCGTCTGGTGATGCTCCAGAAAGAGATTGA 1719 0.491 MGSVSSEDGSDQQSDRCGSYSLSADVSESESCGSFSARRFHADGASTSANLSPRPVSAHFNFPPAQVMLPVIGGKDVVVWDHKRDLDLSERLRFAEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKAMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLSMLDGFHDTQFWYVDRGIILDDSKDCDAYGRPSVRQEEKWWLPSPKLPPNGLSEENRKRLQQCRDCTNQILKAAVAINTFVIAEMEIPGAYVESLPKNGKACLGDIIYRYITADQFSPECLLDCLDLSSEHHTLDIANRIEAAIHVWRLKDHKKHLSSAKARRSWGGKVKGLVADSEKNKNHFLAQRAETLLESLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADSLSLFSRGGFGGMPIQKRFSPSPFSIQHTPYASPFATPSFCSSSPVTGSPCSPARIHDMKRNAPKEGADSKQDNLAKSEFERVWSYAGNLSSRRASGDAPERD 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02744 572 Gene3D PRONE domain, subdomain 1 324 468 - -
Spst2g02744 572 Gene3D PRONE domain, subdomain 1 89 323 - -
Spst2g02744 572 MobiDBLite consensus disorder prediction 520 545 - -
Spst2g02744 572 FunFam Rop guanine nucleotide exchange factor 1 89 328 - -
Spst2g02744 572 MobiDBLite consensus disorder prediction 1 22 - -
Spst2g02744 572 FunFam Rop guanine nucleotide exchange factor 14 329 468 - -
Spst2g02744 572 MobiDBLite consensus disorder prediction 527 545 - -
Spst2g02744 572 ProSiteProfiles PRONE domain profile. 87 469 IPR005512 GO:0005085
Spst2g02744 572 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 32 495 IPR038937 GO:0005085
Spst2g02744 572 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 96 463 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02744 Spst-Chr2 27198051 27200906 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02744 - - gmx:100819455 1085.48