Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02737 ATGGGAGAATTAGGTATCAGAAAAGGTGTTACAAAGCAAGGGGTCAAACCCGGGAAGGCTACCATATTAGCTCTTGGGAAGGCTTTCCCTCATCAGCTTGTCATGCAAGAGTATTTAGTAGATGGATATTTCAGGTGCACAAACTGTGACAATCCTGAGCTTAAGCAGAAGCTCAGTAAACTTTGCAGAACAACCACAGTGAAAACAAGGTACGTGGTTATGTCAGAGGAAATTTTGAAAAAGTATCCAGAACTTGTGGCTGAAGGCATCCCCACAGTGAAGCAGCGGCTAGAGATATGTAACGAGGCAGTCACAGAAATGGCCATAGAGGCTTCACAAGCTTGCATCAAGAACTGGGGTGGATTGTTATCAGACATAACACACTTGGTTTATGTGTCATCCAGTGAAGCAAGACTACCCGGTGGTGACCTTTACCTAGCGAAAGGACTAGGACTGAGTCCTGATACTCAACGAATCATGCTCTATTTCGCAGGTTGTTCTGGAGGTGTGGCTGGCCTACGCATTGCAAAAGACATAGCTGAAAACAACCCTGGAAGTCGGGTGTTGCTTGCTACTTCAGAAACTACAATTATTGGGTTCAAGCCACCAAGTGCTGATAGACCCTATGATCTTGTTGGGGTGGCACTCTTTGGGGATGGTGCTGGTGCCATGATAATTGGTTCAGACCCAATATTGGAGTCAGAGAAGCCTCTCTTTGAGCTTCACACGGCAGTTCAGGAGTTTTTGCCTAAAACTGAGAAGATAATTGATGGGAGGCTGACAGAAGAGGGGATAAGCTTCAAGCTAGCAAGGGAACTTCCTCAGATAATTGAAGACAATGTTGAAGGATTCTGTGACAAATTAATGAGTGTGGTTGGGTTCCAGAATAAGGAGTACAACAAGTTGTTCTGGGCTGTCCATCCAGGGGGGCCTGCTATCTTGAATCACATTGAGAAGAGACTTGATTTGTTGCCAGAGAAGCTGAGTGCAAGTAGAAGGGCTCTAATGGATTATGGCAATGCTAGCAGTAATACCATCGTGTACGTGCTGGAGTATATGATTGAGGAGTGTCTCAAGATTAGAAGAGATGGCAGAGGAGATCCTGAATGGGGCTTGATACTTGCATTTGGACCCGGAGTTACATTTGAGGGAATTATTGCTAGGAACTTGTGTGCTTGA 1179 0.4521 MGELGIRKGVTKQGVKPGKATILALGKAFPHQLVMQEYLVDGYFRCTNCDNPELKQKLSKLCRTTTVKTRYVVMSEEILKKYPELVAEGIPTVKQRLEICNEAVTEMAIEASQACIKNWGGLLSDITHLVYVSSSEARLPGGDLYLAKGLGLSPDTQRIMLYFAGCSGGVAGLRIAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPILESEKPLFELHTAVQEFLPKTEKIIDGRLTEEGISFKLARELPQIIEDNVEGFCDKLMSVVGFQNKEYNKLFWAVHPGGPAILNHIEKRLDLLPEKLSASRRALMDYGNASSNTIVYVLEYMIEECLKIRRDGRGDPEWGLILAFGPGVTFEGIIARNLCA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02737 392 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 13 390 IPR011141 GO:0009058|GO:0016747
Spst2g02737 392 SUPERFAMILY Thiolase-like 16 233 IPR016039 GO:0016746
Spst2g02737 392 Pfam Chalcone and stilbene synthases, N-terminal domain 12 230 IPR001099 -
Spst2g02737 392 CDD CHS_like 20 385 - -
Spst2g02737 392 Gene3D - 238 391 IPR016039 GO:0016746
Spst2g02737 392 FunFam Chalcone synthase 1 238 391 - -
Spst2g02737 392 Gene3D - 6 237 IPR016039 GO:0016746
Spst2g02737 392 PIRSF PKS_III 7 391 IPR011141 GO:0009058|GO:0016747
Spst2g02737 392 SUPERFAMILY Thiolase-like 237 388 IPR016039 GO:0016746
Spst2g02737 392 FunFam Chalcone synthase 2 6 237 - -
Spst2g02737 392 Pfam Chalcone and stilbene synthases, C-terminal domain 240 389 IPR012328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02737 Spst-Chr2 27139272 27140759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02737 86 377 Miscellaneous Gene Families AT4G34250 25.387 1.42e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02737 - - vun:114168705 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02737 2 27139272 27140759 Spst2g02737 2 27139272 27140759 ECH