Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02731 ATGGAATACAGAATCCTGTTACTGACTAGGTTTGAGTTTGAGAGAGCACGAGGAAATGTGGCAGAATTTTTATTAGATAATGTTCATTTTGATTTACGTACATTCTGTGGTTACTGCGATCTTAAGATACTGTTTGGAATCATAGAACATAGGAAGGAAGAACACTCCTTTCAAGAAACAAAATCCCTGGGTTTGAGTGCAGTTGGATTCAACGTTGGGTTTCTCCCTAAAACAGTTTTCGAGTTCCTTATGCAGGCCTTAACCCAGCGCCAAGGAGCACTTTTGTGCTTCTGGTTGTCTGTGCTTTTTGTGGTAGTAGGCTTTTGCTATGGTGACCATAGTACAGTGGAGGTAGTTGGATTGGGAGAATGCACGGACTGCAAGGATAAAAATATCAAAACTAGCCAGGCTTTCTCAGGGCTACGTGTAACAGTAGACTGCAAAGCAGCAAGTGGAGACTTTGAAAGGAGAGGGGTTGGTGAGCTTGATGAAAATGGAAACTTCAAAGTGTCCCTTCCTCGTGACATCGTGAAAGCTGATGAACTGAAAGAAGAATGTTATGCTCAGATACTCAGTGCATCAGCTGCTCCTTGCCCTTCCCATGATGGTCCTTTCAGCACCAAAATTGTGATCAAGTCAAAAGGTGATGACAAACACACACTTGGTCCTGCTGGGAAACTCAAGTTTTCTTCAGAGACATGCGCTTCAGCTTTCTTCTGGAAGCACCACCCTCTCTTGCCTAAGCTTCCCCCCCATCCACCTATCACCATCCCTCCTATAGTAGTTCCACCACTTCCACCAAAAATTTTCCATAAACATCCTCCTCCTGTCTACACTCCTCCTCCTGTTTATACTCCTCCACCTGTCTATACTCCTCCTCCTGTTTATACTCCGCCACCTGTCTATACTCCTCCTGCTGTTTATACTCCTCCACCTGTCTATACTCCTCCTCCTGTTCCAAAGGTTATTAAGCCTCCACCATCCCCACCAAAGGAGCCTCCTCATCCAAAACCACCAAAGCTATGCCCCCCAAAGGTTAAGCCTCCTCTTCCACCAAAACCACCAAAGCAGCCTCCTCAGCCAAAACCACCAAAACCACCAAAGCCATGCCCCCCAAAGGTTAAGCCTCCTCTTCCACCAAAACCACCAAAGCAGCCTCCTCAGCCAAAACCACCAAAGCCATGCCCCCCTCCTCTTCCACCAAGACCACCAAAGGAACCTCCTCACCCAAAACCACCAAAGGTCAAGCCTCCTCCTGTTCCGCCGCCAACACCACCAGTTAAGCCTATCCCCCCACCGGTTCCAATCTACAAGCCACATCCACCTATTCCACTCCCTCCACTCAAGCCACATCCACCTATTCCACTCCCTCCATTCAAGCCACATCCACCTATTCCACTTCCTCCACTCAAACCACATCCGCATCCGCTTCTTCCACCACTCCCTCCACTCAAGCCACATCCACCTATTCCACTCCCTCCACTCAAGCCACATCCACTTCTTCCTCCACTCCCTCCACTCAAGCCACATCCACATCCGCTTCTCCCTCCTCTAAAGCCACTTCCACCTCTTCCCAAACTTCCTCCAAAGCACTTTTTCCATCACCCCAAATGGCCTCCAGCTGGGAACAGAGAAATGCAACGCGACTTAAGACAGACAACAGAGTAA 1668 0.4844 MEYRILLLTRFEFERARGNVAEFLLDNVHFDLRTFCGYCDLKILFGIIEHRKEEHSFQETKSLGLSAVGFNVGFLPKTVFEFLMQALTQRQGALLCFWLSVLFVVVGFCYGDHSTVEVVGLGECTDCKDKNIKTSQAFSGLRVTVDCKAASGDFERRGVGELDENGNFKVSLPRDIVKADELKEECYAQILSASAAPCPSHDGPFSTKIVIKSKGDDKHTLGPAGKLKFSSETCASAFFWKHHPLLPKLPPHPPITIPPIVVPPLPPKIFHKHPPPVYTPPPVYTPPPVYTPPPVYTPPPVYTPPAVYTPPPVYTPPPVPKVIKPPPSPPKEPPHPKPPKLCPPKVKPPLPPKPPKQPPQPKPPKPPKPCPPKVKPPLPPKPPKQPPQPKPPKPCPPPLPPRPPKEPPHPKPPKVKPPPVPPPTPPVKPIPPPVPIYKPHPPIPLPPLKPHPPIPLPPFKPHPPIPLPPLKPHPHPLLPPLPPLKPHPPIPLPPLKPHPLLPPLPPLKPHPHPLLPPLKPLPPLPKLPPKHFFHHPKWPPAGNREMQRDLRQTTE 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02731 555 MobiDBLite consensus disorder prediction 413 482 - -
Spst2g02731 555 Coils Coil 543 555 - -
Spst2g02731 555 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 90 203 - -
Spst2g02731 555 MobiDBLite consensus disorder prediction 324 406 - -
Spst2g02731 555 MobiDBLite consensus disorder prediction 531 555 - -
Spst2g02731 555 Pfam Pollen protein Ole e 1 like 118 199 - -
Spst2g02731 555 MobiDBLite consensus disorder prediction 324 482 - -
Spst2g02731 555 PRINTS Proline rich extensin signature 318 343 - -
Spst2g02731 555 PRINTS Proline rich extensin signature 287 303 - -
Spst2g02731 555 PRINTS Proline rich extensin signature 247 259 - -
Spst2g02731 555 PRINTS Proline rich extensin signature 264 285 - -
Spst2g02731 555 MobiDBLite consensus disorder prediction 541 555 - -
Spst2g02731 555 PRINTS Small proline-rich protein signature 415 424 - -
Spst2g02731 555 PRINTS Small proline-rich protein signature 333 342 - -
Spst2g02731 555 PRINTS Small proline-rich protein signature 389 397 - -
Spst2g02731 555 PRINTS Small proline-rich protein signature 364 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02731 Spst-Chr2 27108861 27116438 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02731 - - vum:124829568 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02731 2 27108861 27116438 Spst2g02731 2 27108861 27116438 ECH