Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02724 ATGGTCCAACCGGCGATGACGCAGTTCCTTAACTCCGTCCTCTCCCAGCGCGGCCCCTCCGCCGTCCCTTACTCCGAGGATACCAAGTGGCTTATCCGCCAGCATCTGGTGGCGCTCACCACCGCCTTCCCTTCGCTCGAGCCCAAAACGGCCTCCTTTACGCACAACGACGGTCGTTCCGTCAACCTCCTCCAGGCCGACGGCACCATCCCCATGACTTTCCAAGGCGTCACCTACAACATCCCAGTCGTCATCTGGCTCATGGAGTCCTACCCCCGCCACCCGCCCTGCGTCTACGTGAATCCCACGCGCGACATGATCATCAAGCGCCCCCACCCTCACGTTAACCCTTCCGGTTTGGTTTCCGTCCCTTACTTGCAGAATTGGACCTACCCTAGTTCCAACCTCGTCGATCTCATTCTCAATCTAAGCCTCCACTTCGGTCGCGACCCTCCCCTCTATTCCCAACGCAGACCTAGCCCTAGCCCTAATCCCAATCCCAATCCAAATCCTCACCCTCATCCTCCCAATTTCGGAAACTCTTCTTCTAATTTGTCTTCTTCTTCTTCTTCTTCTTTATCTGGTTACCCCCACCACCACCCCCCTTCCAGGACTTACCCTCCTTCCCCTTACCCTGCTCCCGCTTCTAGGGTTCAGAACACTGAGGATCCTTCCGAGGTTTTCAAGCGGAACGCGATTAACAAGCTTGTGGAGATGGTTCATGGCGATGTTTCCTCCTTGAGGAAGACCAGGGAGGGTGAGATGGAGGGGCTGTTTAGTTTGCAGGGCGTGTTAAAGCAGCGGGAGGAGAGTCTCAACAAGGGGTTGAAGGAGATGCAGGAGGAGATGGAGGCCCTGGAGCAGCAGTTGCAGATTGTGTTGATGAACACTGATGTTTTGGAGGGGTGGTTGAGGGATAACCAGGGGAAGAAGATTGGGGGTCTGGAGAACCCTGAGGATGCTTTTGAGTGTGTGGATGTGCTCTCCAAGCAGATGCTTGACTGCACTGCTGCTGATTTGGCGATTGAGGACACGCTTTATGCGTTGGATAAGGCTCTTCAGGTGGGGGCTGTGCCGTTTGATCAGTACTTGAGGAGTGTGAGGTCGCTGTCCAGGGAGCAGTTCTTTCACCGCGCCACCGCCGCGAAAGTTAGGGCGGCTCAGCTGCAGGCTCAGGTTGCCAATATGGCTGCTCGGAATCAGCGTTACGGTAGCTGA 1218 0.5583 MVQPAMTQFLNSVLSQRGPSAVPYSEDTKWLIRQHLVALTTAFPSLEPKTASFTHNDGRSVNLLQADGTIPMTFQGVTYNIPVVIWLMESYPRHPPCVYVNPTRDMIIKRPHPHVNPSGLVSVPYLQNWTYPSSNLVDLILNLSLHFGRDPPLYSQRRPSPSPNPNPNPNPHPHPPNFGNSSSNLSSSSSSSLSGYPHHHPPSRTYPPSPYPAPASRVQNTEDPSEVFKRNAINKLVEMVHGDVSSLRKTREGEMEGLFSLQGVLKQREESLNKGLKEMQEEMEALEQQLQIVLMNTDVLEGWLRDNQGKKIGGLENPEDAFECVDVLSKQMLDCTAADLAIEDTLYALDKALQVGAVPFDQYLRSVRSLSREQFFHRATAAKVRAAQLQAQVANMAARNQRYGS 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02724 405 MobiDBLite consensus disorder prediction 156 176 - -
Spst2g02724 405 Coils Coil 269 296 - -
Spst2g02724 405 SUPERFAMILY UBC-like 15 153 IPR016135 -
Spst2g02724 405 PANTHER TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED 1 393 - -
Spst2g02724 405 Pfam UEV domain 33 153 IPR008883 GO:0015031|GO:0036211
Spst2g02724 405 MobiDBLite consensus disorder prediction 177 198 - -
Spst2g02724 405 Gene3D Ubiquitin Conjugating Enzyme 1 154 IPR016135 -
Spst2g02724 405 Gene3D - 327 387 - -
Spst2g02724 405 MobiDBLite consensus disorder prediction 152 225 - -
Spst2g02724 405 ProSiteProfiles Steadiness box (SB) domain profile. 326 394 IPR017916 -
Spst2g02724 405 SUPERFAMILY Endosomal sorting complex assembly domain 326 386 IPR037202 -
Spst2g02724 405 ProSiteProfiles UEV domain profile. 13 157 IPR008883 GO:0015031|GO:0036211
Spst2g02724 405 Pfam Vps23 core domain 321 383 IPR017916 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02724 K12183 - gmx:100778834 667.537