Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02720 ATGGCCTCAACGACTCTAACAACCCTCACCCTTCGCTCCCTATCTCATCCTACACCCTCCTCTTACTCTGCGCACCTCTCCGCCAAACCCTCCCTCCAATTCCCCAACCTCTACCACCGGGCCACCACCGCCACTCGCCGCGCCCGCGTCGTCGTCTCTGCCGTGGCCGCGCCGGAGAAAATCACCAAGCTCGGCGACGAAATCGCCGGACTCACCCTCGAGGAGGCGAAGAACCTCGTGGATTTCCTCCAGGACAAGCTGGGCGTCTCCGCTGCGGCTTTCGCTCCCGTGGCTGCTGTCGCGGCTCCCGGAGCCGCGGCGGACGCACCGGCTGCGGTGGAGGAGAAGACGGAGTTCGACGTGGTGATCGAGGAGGTGCCGAGCAATGCGAGAATCGCGGTGATTAAGGCGGTGAGAGCTTTGACGAGCCTGGCGCTGAAGGAGGCGAAGGAGTTGATCGAAGGGTTACCGAAGAAGTTCAAGGAAGGGGCTTCGAAGGAAGAAGCTGAAGATGCTAAGAAGCAACTTGAAGAAGCGGGTGCCAAGGTTGCCATTGTTTAG 561 0.6114 MASTTLTTLTLRSLSHPTPSSYSAHLSAKPSLQFPNLYHRATTATRRARVVVSAVAAPEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAAVAAPGAAADAPAAVEEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGASKEEAEDAKKQLEEAGAKVAIV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02720 186 Hamap 50S ribosomal protein L7/L12 [rplL]. 56 186 IPR000206 GO:0003735|GO:0005840|GO:0006412
Spst2g02720 186 PANTHER 39S RIBOSOMAL PROTEIN L12 36 185 IPR000206 GO:0003735|GO:0005840|GO:0006412
Spst2g02720 186 Gene3D Single helix bin 59 114 IPR036235 GO:0003735|GO:0005840|GO:0006412
Spst2g02720 186 CDD Ribosomal_L7_L12 59 185 IPR000206 GO:0003735|GO:0005840|GO:0006412
Spst2g02720 186 FunFam 50S ribosomal protein L7/L12 115 186 - -
Spst2g02720 186 Gene3D - 115 185 IPR014719 -
Spst2g02720 186 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 60 121 IPR036235 GO:0003735|GO:0005840|GO:0006412
Spst2g02720 186 SUPERFAMILY ClpS-like 114 185 IPR014719 -
Spst2g02720 186 Pfam Ribosomal protein L7/L12 dimerisation domain 60 109 IPR008932 GO:0003735|GO:0005840|GO:0006412
Spst2g02720 186 Pfam Ribosomal protein L7/L12 C-terminal domain 119 185 IPR013823 GO:0003735|GO:0006412
Spst2g02720 186 NCBIfam 50S ribosomal protein L7/L12 63 185 IPR000206 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02720 Spst-Chr2 27016173 27016733 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02720 K02935 - gmx:100779891 245.743