Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02715 ATGGAGGGAAAAGGAACAGGAACCGCCACAGGGTGTTACAAGTGCGGCAGACCAGGTCACTGGTCACGAGACTGCCCTTTCTCTGCTCCCAATTCCAATCCAAACCCTAACGCCTCCACCGATCCCAATCCCAATCCCAATCCTTCTTCCTCTTCTTTCAAGCCCAGATCCGCCGCCGAAAAGCCCAAGAAACTCCCCCGAACTAAGCCCAAACTCACACCGGAGATTCTTCTTTCCGACGACGGCCTCGGTTACGTTCTTCGCTATTTCCCACGCGAGTTCAAATACCGTGGTCGCGGCCACGAGGTTCGTGATTTGGGTAACCTGCTTCGGTTGTACACCGAATGGCACTCTCGGTTGCTCCCTTATTACTCTTTCAATCAGTTTATTCACAAAGTGGAGAAAGTTGCCGCCACCAGGCGTGTCAAGACTTGCCTTGGAGAATTAAGAGAAAGAGTTGCAAGTGGTGGAGATCCAACGAAACTGCGGGAACCACCGGTTGTGCATGACATTCCATCTGTTGAACACGGATTTGCTGGATCTGCTGACGATGGGGGAGCAACTCATCAAGAGACAGATGTGTTTCCAGATTCTGAATTTGTTACTGACACTCAGGAAGACATGCTTAATGATATATATGATAAAGCTACCGAAGAACCTTCTCAGTCCATGGACAATGTGATTGGCACTAGCACGGCTTCAACAAGTAACTTAATCGAAAAGATAGCAGAGGAAGTCCACAATAATGGATCCAGCGACTCTGGCAAAGCTGAGATAACAGAAGAGCAGAGAGCTCGTATGGAAGCAAATAGGTTGAAGGCACTACAAAGGCGTGCTGCTCGAGCTGCCTCATCACAGGCCTCCTAA 867 0.4948 MEGKGTGTATGCYKCGRPGHWSRDCPFSAPNSNPNPNASTDPNPNPNPSSSSFKPRSAAEKPKKLPRTKPKLTPEILLSDDGLGYVLRYFPREFKYRGRGHEVRDLGNLLRLYTEWHSRLLPYYSFNQFIHKVEKVAATRRVKTCLGELRERVASGGDPTKLREPPVVHDIPSVEHGFAGSADDGGATHQETDVFPDSEFVTDTQEDMLNDIYDKATEEPSQSMDNVIGTSTASTSNLIEKIAEEVHNNGSSDSGKAEITEEQRARMEANRLKALQRRAARAASSQAS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02715 288 ProSiteProfiles Zinc finger CCHC-type profile. 12 26 IPR001878 GO:0003676|GO:0008270
Spst2g02715 288 SUPERFAMILY Retrovirus zinc finger-like domains 7 28 IPR036875 GO:0003676|GO:0008270
Spst2g02715 288 MobiDBLite consensus disorder prediction 257 275 - -
Spst2g02715 288 MobiDBLite consensus disorder prediction 245 288 - -
Spst2g02715 288 Pfam Zinc knuckle 11 26 IPR001878 GO:0003676|GO:0008270
Spst2g02715 288 MobiDBLite consensus disorder prediction 24 73 - -
Spst2g02715 288 Coils Coil 257 277 - -
Spst2g02715 288 SMART c2hcfinal6 11 27 IPR001878 GO:0003676|GO:0008270
Spst2g02715 288 Pfam Replication Fork Protection Component Swi3 71 152 IPR012923 GO:0005634|GO:0006974|GO:0031297
Spst2g02715 288 Gene3D - 6 56 - -
Spst2g02715 288 PANTHER TIMELESS INTERACTING-RELATED 5 283 IPR040038 GO:0000076
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02715 K10998 - gmx:100808422 429.098