Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02706 ATGGCCACTCTTCAATTCACCTTCACCGACTCAACCTCCTTGTTCAGGCCTTCTCTCCCTTCCTCGCGAACTTTCCATCGGAATCGAAGCCTCATTGTCAGAGCCTCTTCTTCTTTCGACGACTTCTCCCGGAGCAGGAGACGCTTGCTCGCCGAAACCGCCGCAATTTCGGTTTCGCTTCCTCACTTTGCGGCGAGGGCCGAAGACACGCTTTCGGAGTGGGAGAGAGTGTACCTCCCCATCGACCCCGGCGTCGTGCTTCTTGACATCGCTTTTGTCCCCGAAGACCCCAACCACGGTTTTCTCCTCGGGACGAGACAAACAATTCTGGAGACGAAGGATGGAGGAAACACTTGGGCTCCGCGTTCCATTCCCTCTGCCGAAGACGAAGATTTCAACTATCGCTTCAATTCTATCAGTTTCAAAGGGAAGGAAGGGTGGATAGTTGGAAAACCTGCGATTCTGTTGTACACTGCTGATGCTGGAGCAAGCTGGGAGAGAATACCGCTCAGTGCTGAACTTCCAGGGGATATGGTGTACATAAAGGCGACCGGTGAGAAGAGTGCAGAGATGGTGACTGACGAAGGTGCAATATATATTACTGCTAACAGAGGTTACAACTGGAGGGCTGCTGTTCAGGAAACTGTGTCAGCTACTCTTAACAGAACAGTTTCTAGTGGTATTAGTGGTGCAAGCTATTACACTGGGACTTTCAATACTGTCAATCGCTCTCCAGATGGAAGGTATGTTGCAGTCTCAAGTCGGGGCAACTTCTACTTAACCTGGGAGCCTGGTCAGCCATTCTGGCAGCCACATAATAGAGCAGTTGCCAGAAGAATACAGAACATGGGATGGAGAGCTGACGGTGGTCTGTGGCTTCTTGTTCGTGGAGGTGGTCTTTATCTCAGCAAGGGCACAGGGTTAACTGAAGAATTTGAGGAGGTTCCTGTTCAAAGCCGGGGTTTTGGCATTCTTGATGTTGGATATCGTTCAACGGATGAAGCTTGGGCAGCAGGAGGAAGTGGTATTCTTTTGAGAACTACTAATGGTGGCAAGTCATGGATCCGCGACAAAGCTGCCGACAACATTGCTGCAAATTTATACTCAGTAAAGTTCATTGATGACAAGAAGGGATTTGTACTGGGGAATGATGGAGTCTTGCTTCGCTACCTTGGATAG 1179 0.4979 MATLQFTFTDSTSLFRPSLPSSRTFHRNRSLIVRASSSFDDFSRSRRRLLAETAAISVSLPHFAARAEDTLSEWERVYLPIDPGVVLLDIAFVPEDPNHGFLLGTRQTILETKDGGNTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTADAGASWERIPLSAELPGDMVYIKATGEKSAEMVTDEGAIYITANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02706 392 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 12 392 - -
Spst2g02706 392 Pfam Photosynthesis system II assembly factor YCF48 70 390 IPR028203 -
Spst2g02706 392 Gene3D - 126 362 IPR015943 GO:0005515
Spst2g02706 392 PIRSF Photosystem_II_Ycf48-like 37 392 IPR016705 -
Spst2g02706 392 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 73 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02706 Spst-Chr2 26839625 26843270 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02706 - - gmx:100810566 751.51