Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02697 ATGAAGAACCTGAACATCTCTTTGTGCGTGCTTTTCCTAGCTCTTGTGCGTTTAGGGAGAACTGCACCCTCAAGCTTCAACTATGGTGATGCCCTTGACAAGAGTTTGATGTTCTTTGAGGCACAAAGATCTGGTAAGTTACTAGTGCAGCAGCGAGTCAAGTGGCGTGGTGATTCTGGCCTCCAAGATGGTTTTCAGCAAGGAGTAGACCTGGTGGGAGGGTACTATGATGCAGGAGACCATGTGAAGTTTGGTTTGCCTATGGCCTACAGTGTCACAATGCTTGCATGGGGAGCCATTGAGTTCAACAAGGAAATTACGAGCTTGAACCAAATGGGACACGCATTATGGGCCATTAAATGGGGAACTGATTACTTTGTCAAAGCACACACTCAACCCAATGTTCTTTGGGGACAGGTGGGAGATGGAGTTTCTGACCATTACTGCTGGGAGCGTGCTGAAGACATGACTACATCAAGAGGTGCCTACAAAATTGATGAAGAACACCCTGGCTCTGATCTGGCAGGTGAAACTGCAGCTGCACTGGCTGCTGCAGCTATAGCTTTCAGTCCCTACAACTCTTCTTACTCTAGTCTCCTGCTTGCTCATTCAAAACAGCTCTTCACATTCGCAGATAGGTTCAGAGGTCTCTATGATGTATCTATTTCAAGCGCTCAGCAATTCTACACTTCTTCCGGTTACTCAGATGAATTGTTATGGGCTGCCACTTGGCTATACCAGGCAACTGGGGATGAATACTACCTAGAGTATGTAGTGGACAATGGTGTGTATATGGGTGGAACTGGCTGGGCAGTAAAAGAGTTCTCTTGGGACAACAAATATGCTGGTGTGCAGATCCTCCTATCAAAGATATTGCTAGAAGGAAAGGCTGGTCCTTACGCTGATACCCTAAAGCAATACCAGGCCAAGGCAGATTATTTTTCATGTGCCTGCTTGCAAAAGAATGATGGTTACAATGTCCAGAAAACACCAGGTGGCTTACTATACGTGCATGAATGGAACAACATGCAGTATGCTTCTTCTGCTGCATTCCTTTTAGCTGTTTACTCTAATTACCTCTCAACAACAAAAGCACAGCTCAACTGTCCAGATGGACAAACTCAGCCTCAGGAGCTTCTCAATTTTGTTAAGTCTCAGGCTGATTATATCCTCGGTAATAACCCAGCGGGTATGAGCTACTTGGTTGGATATGGAGCAAAATATCCTCTTCATGTTCATCACAGAGGCGCTTCCATTGCTTCAATCTTTGCTCTTCACTCTGAGGTTGGCTGCACTCAAGGATTTGAGCTGTGGTATAACCGCGCTGAGCCAAATCCTAATGTCATCTGTGGTGGCCTCGTGGGTGGGCCCGATGAAAATGATGGCTTCTCTGATGACAGATCCAATTATGAACAAACTGAGCCTACAGTTTCAGGTTCTGCTCCTCTTGTAGGCATCTTTGCTAAACTGCAGAGTTTGTATGGTAATATAGAAGGTTACAACCATAATCCATCACCAGTGCCCCAGCAAAAAACACCAAGTGAGTATCATAGAACTTGTTGTTTTGTTCCGCATACAGATGTTACAACCATAATGAATCACCAGTGCCCCAGCAAAAAATACAAAGTTACAATCAAAATGAATCACCAGTGCCCCAACAAAAAACACCAAGTCAGTATTATAGTCTTTAGAACTTCTTGGTTCAACGTCCGTTATGTGATTTTCAGGTTTACTCAGAAGCTAACAATTATAGCTTCTGCATTTTGTAACATAATTGACATTGTTTCTGACTTTGGTACATATTCAGGAAAAGAAACGGCATCTAAAACATCAGAAGATGCCCCAGTTGAATTCCTTCACTCAATTACTAGTTCATGGACTGTTGGAGGTGCAACTTACTACCGTCACAGGGTTATAATCAAGAACACTTCTTCGAAGCCAATCTCAGATCTTAAGTTGGTGGTTCAGGATCTCTCAGGCACTTTATGGGGTCTCTCTCCAACAGAAGAAAAGGACACCTATGAACTTCCCCAATGGCATCAGGTCTTGAATCCTGGCTCTGAGTATATATTTGTATACGTTCAAGGTGGACCCCAGGCTAAAGTCTCCATTAAAACCTTCCAATGA 2127 0.4396 MKNLNISLCVLFLALVRLGRTAPSSFNYGDALDKSLMFFEAQRSGKLLVQQRVKWRGDSGLQDGFQQGVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFNKEITSLNQMGHALWAIKWGTDYFVKAHTQPNVLWGQVGDGVSDHYCWERAEDMTTSRGAYKIDEEHPGSDLAGETAAALAAAAIAFSPYNSSYSSLLLAHSKQLFTFADRFRGLYDVSISSAQQFYTSSGYSDELLWAATWLYQATGDEYYLEYVVDNGVYMGGTGWAVKEFSWDNKYAGVQILLSKILLEGKAGPYADTLKQYQAKADYFSCACLQKNDGYNVQKTPGGLLYVHEWNNMQYASSAAFLLAVYSNYLSTTKAQLNCPDGQTQPQELLNFVKSQADYILGNNPAGMSYLVGYGAKYPLHVHHRGASIASIFALHSEVGCTQGFELWYNRAEPNPNVICGGLVGGPDENDGFSDDRSNYEQTEPTVSGSAPLVGIFAKLQSLYGNIEGYNHNPSPVPQQKTPSEYHRTCCFVPHTDVTTIMNHQCPSKKYKVTIKMNHQCPNKKHQVSIIVFRTSWFNVRYVIFRFTQKLTIIASAFCNIIDIVSDFGTYSGKETASKTSEDAPVEFLHSITSSWTVGGATYYRHRVIIKNTSSKPISDLKLVVQDLSGTLWGLSPTEEKDTYELPQWHQVLNPGSEYIFVYVQGGPQAKVSIKTFQ 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02697 708 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 389 415 IPR018221 -
Spst2g02697 708 SUPERFAMILY Six-hairpin glycosidases 25 498 IPR008928 GO:0005975
Spst2g02697 708 FunFam Endoglucanase 24 495 - -
Spst2g02697 708 Pfam Glycosyl hydrolase family 9 28 486 IPR001701 GO:0004553|GO:0005975
Spst2g02697 708 Pfam Carbohydrate binding domain CBM49 617 695 IPR019028 GO:0030246
Spst2g02697 708 Gene3D - 24 494 IPR012341 GO:0005975
Spst2g02697 708 SMART CBM49_2 616 696 IPR019028 GO:0030246
Spst2g02697 708 PANTHER ENDO-1,4-BETA-GLUCANASE 11 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02697 Spst-Chr2 26656361 26660655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02697 600 707 Glycoside Hydrolase AT1G48930 60.185 4.08e-34 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02697 K01179 - gmx:100802420 957.592