Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02687 ATGAAAAGAGGATTTGGTGTTAGAGCTTTGCTCATTTCCTTTCGAAACTCTACCCCTCTCTCGCCGCCACTCTCTACCCCCTTTCGCGCCGCCAGATCTCTTCACTCTGCCTCGTCTTCCGCCGCAGCCATGCCCGGAGCTGAGACTCACGATGTGGAGTGGCCGGCGAAGCGCGTGAGGGACACTTACCTGAGCTTTTTCCAAAACAAGAATCACGTCAACTGGAAGTCCAGCCCCGTTGTCCCCTTCAATGACCCCACTCTTCTCTTCGCCAACGCTGGAACTGCGGATCCCAACACTGCCTTGAGCAAACTCTCTCGTGCTTGCAACACGCAGAAGTGCATTCGAGCGGGTGGTAAACACAACGATCTTGATGATGTAGGGAAGGATACCTACCATCACACCTTCTTTGAGATGTTGGGCAATTGGTCCTTTGGGGATTACTTTAAAGCAGAAGCCATCAGCTGGGCGTGGGAGCTTCTAACCAATGTTTACAAGTTACCATCAGATCGCATATATGCCACATATTTTGGTGGTGATGATAAGGCTGGTCTTGGCCCTGATTTAGAGGCTAGAGATATATGGCTAAAGTTTTTACCTCCTGAACGTGTGCTTCCTTTTGGCTGTAAAGACAATTTCTGGGAAATGGGTGATACCGGTCCTTGCGGACCTTGCACTGAAATACATTTTGACAGAATTGGTAACCGTGATGCTTCATCGTTGGTTAATTATGATGATCCTACTTGCATTGAGATATGGAATCTTGTCTTTATTCAGTTCAATAGGGAGGCTGATGGCTCTCTTAAACCCCTTCCAGCAAAGCATGTTGATACAGGCTTGGGTTTTGAACGATTGACCTCTATACTACAGGAAAAAATGAGCAATTATGACACTGATGTCTTCTTGCCAATCTTTGATGGTATTCAGCGGGCAACTGGTGCCAGACCTTATTCTGGGAAAGTTGGACCAGATGATGTTGATAAAGTTGATATGGCATACAGGGTTGTTGCAGATCACATAAGAACTCTTTCATTTGCCATTGCTGATGGGTCTCGTCCTGGTAATGATGGTCGTGAGTATGTTCTAAGACGAATACTCCGTCGAGCTGTTCGTTATGGACGTGAAGTGTTAAAAGCTAAAGAGGGATTTTTCAACGGGCTTGTAAGTGTGGTGGTGAATGTCATGGGTGATGTTTTCCCTGAGCTAAAACAACAGGAAACACACATTCGGAATGTAATTGAAGAGGAGGAGGAAAGTTTTGGAAGAACCTTAATTAAGGGTATTGAGAAATTTGAGACAGCTGTTCGACATGAAGCATTTATCTTGTGGGATACTTACGGATTCCCATTAGATCTCACTCAGCTGATGGCTGAAGAAAAGGGATTAGTTGTTGATGTTAAAGGTTTTGATAGTGCCATGGAGACTGCAAGAGAGAGATCGAGAAGTGCTCAAACAAAGCAAGCTGGTGGTGCCATTGTTATGGATGCTGATGCTACCTCAGCATTGCACAAAAGGGGCATTGCCCCAACAGATGATAGCTTCAAATATGCTTGGTTCAAGGACCATGAGAGTGTGGTAAAAGCAATATATACTGGTTCTGAGTTTGTTGATGCTGTTAATACCGGTGATGATATTGGTTTAGTCCTGGAATCTACAAGCTTCTATGCCGAGCAAGGTGGTCAGATTTTTGATACTGGATTGCTTGAGGGTCCACATGGTTCATTTCAAGTGTGTAACACTCAAGTTTATGGAGGCTTTGTTCTTCACATTGGCAATGGGACCGGTGTATCTGTTGGTGACCATGTAGTATGCAAGGTTGACTATGGTAGACGTGCCCTTATAGCCCCTAACCATACCTGCACGCACATGTTAAACTTTGCTCTTCGGGAAGTACTTGGTGATCATGTTGACCAGAAAGGATCCATTGTTCTACCTGAAAAATTGAGATTTGACTTTTCTCATGGCAAGCCTGTTGATGCTGACAATTTAAGGAGAATTGAGTCAATTGTTAATGAGCAAATTAAAGCTGAACTGGATGTAAGTGCAAAGGAGGCAACCCTTGCGGAAGCCAAACGTATTAATGGTTTAAGAGCTGTTTTTGGAGAAGTCTATCCTGATCCTGTTAGAGTTGTGTCTATTGGACAAAAAGTTGAGGATATTCTCGCTGACCCTGAGAATGAAAAATGGTTATCTATTTCATCAGAACTATGTGGAGGCACCCATATTTCAAACACACGAGAGGCAAAAGCTTTTGCGCTTTTATCCGAGGAGGGCATTGCAAAAGGCATACGCAGAATAACAGCTGTCACAACTGATCGTGCTTATGATGCAATGAAAGCGGCAGATGAATTTGAGCAGCAAGTAGATGATGCAGCTAAGTTAGAAGGAAGTTTGCTAGAAGAGAAAGTTTCATCATTGAAAAGCAATATTGAAACACTATCAATTCCTGCTGCGAAGAAAGCTGAAATCAAGACTAAGATAGCTCGACTTCAGGATCAAGTGAGGAAAGCACAAAAGCAGGTTGCTGAGGAAAACAAACGTAAAGCTGTAATCATTACAGCTGAGAAAGCTGAGCTTGCTGCTTCTAATGGGAAAACATTTTGCATATCTCGTGTTGACGTTGGTCTGGATGTAGCTGCAGTACGTGAGGCTGTTACAAAAGTCATGGACCAGAAGGGATTATCTGTGATGGTTTTTAGCACGGATGAATCCACAAACAAGGCTGTAATTTGTGCTGGGGTGCCAGAGAAAGGAGATAAAGGTAAGCTGGATGTGACAGAGTGGCTGAGTAATTCGTTGGGGCCTCTAAAAGGGAGATGTGGTAAAGGAAAAGGTGGTCTTGCAACGGGTCAGGGTACAGACGCAGCACATGTAAACGAGGCTATGGATCTTGCAGAAAAATTTGCATCAATAAAATTGAGTTAA 2925 0.4397 MKRGFGVRALLISFRNSTPLSPPLSTPFRAARSLHSASSSAAAMPGAETHDVEWPAKRVRDTYLSFFQNKNHVNWKSSPVVPFNDPTLLFANAGTADPNTALSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKAEAISWAWELLTNVYKLPSDRIYATYFGGDDKAGLGPDLEARDIWLKFLPPERVLPFGCKDNFWEMGDTGPCGPCTEIHFDRIGNRDASSLVNYDDPTCIEIWNLVFIQFNREADGSLKPLPAKHVDTGLGFERLTSILQEKMSNYDTDVFLPIFDGIQRATGARPYSGKVGPDDVDKVDMAYRVVADHIRTLSFAIADGSRPGNDGREYVLRRILRRAVRYGREVLKAKEGFFNGLVSVVVNVMGDVFPELKQQETHIRNVIEEEEESFGRTLIKGIEKFETAVRHEAFILWDTYGFPLDLTQLMAEEKGLVVDVKGFDSAMETARERSRSAQTKQAGGAIVMDADATSALHKRGIAPTDDSFKYAWFKDHESVVKAIYTGSEFVDAVNTGDDIGLVLESTSFYAEQGGQIFDTGLLEGPHGSFQVCNTQVYGGFVLHIGNGTGVSVGDHVVCKVDYGRRALIAPNHTCTHMLNFALREVLGDHVDQKGSIVLPEKLRFDFSHGKPVDADNLRRIESIVNEQIKAELDVSAKEATLAEAKRINGLRAVFGEVYPDPVRVVSIGQKVEDILADPENEKWLSISSELCGGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDRAYDAMKAADEFEQQVDDAAKLEGSLLEEKVSSLKSNIETLSIPAAKKAEIKTKIARLQDQVRKAQKQVAEENKRKAVIITAEKAELAASNGKTFCISRVDVGLDVAAVREAVTKVMDQKGLSVMVFSTDESTNKAVICAGVPEKGDKGKLDVTEWLSNSLGPLKGRCGKGKGGLATGQGTDAAHVNEAMDLAEKFASIKLS 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02687 974 Gene3D - 514 606 - -
Spst2g02687 974 SUPERFAMILY Translation proteins 533 606 IPR009000 -
Spst2g02687 974 ProSiteProfiles Alanyl-transfer RNA synthetases family profile. 54 780 IPR018165 GO:0003676|GO:0004813|GO:0005524|GO:0006419
Spst2g02687 974 FunFam Alanine--tRNA ligase, cytoplasmic 607 782 - -
Spst2g02687 974 Pfam tRNA synthetases class II (A) 59 608 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
Spst2g02687 974 Pfam DHHA1 domain 829 968 IPR003156 GO:0003676
Spst2g02687 974 Coils Coil 820 847 - -
Spst2g02687 974 Gene3D - 860 969 - -
Spst2g02687 974 Hamap Alanine--tRNA ligase [alaS]. 54 973 IPR023033 GO:0004813
Spst2g02687 974 Pfam Threonyl and Alanyl tRNA synthetase second additional domain 708 766 IPR012947 GO:0004812|GO:0005524|GO:0043039
Spst2g02687 974 PANTHER ALANYL-TRNA SYNTHETASE 48 970 - -
Spst2g02687 974 FunFam Alanine--tRNA ligase, cytoplasmic 53 293 - -
Spst2g02687 974 FunFam Alanine--tRNA ligase 509 605 - -
Spst2g02687 974 SUPERFAMILY Class II aaRS and biotin synthetases 56 296 IPR045864 -
Spst2g02687 974 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 297 488 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Spst2g02687 974 SMART tRNA_SAD_4 708 767 IPR012947 GO:0004812|GO:0005524|GO:0043039
Spst2g02687 974 Gene3D Bira Bifunctional Protein; Domain 2 55 293 IPR045864 -
Spst2g02687 974 SUPERFAMILY ThrRS/AlaRS common domain 606 781 IPR018163 GO:0000166
Spst2g02687 974 CDD AlaRS_core 56 292 - -
Spst2g02687 974 Gene3D - 607 783 - -
Spst2g02687 974 FunFam Alanine--tRNA ligase 862 969 - -
Spst2g02687 974 NCBIfam alanine--tRNA ligase 59 951 IPR002318 GO:0000166|GO:0005737
Spst2g02687 974 PRINTS Alanyl-tRNA synthetase signature 250 261 IPR002318 GO:0000166|GO:0005737
Spst2g02687 974 PRINTS Alanyl-tRNA synthetase signature 334 350 IPR002318 GO:0000166|GO:0005737
Spst2g02687 974 PRINTS Alanyl-tRNA synthetase signature 122 133 IPR002318 GO:0000166|GO:0005737
Spst2g02687 974 PRINTS Alanyl-tRNA synthetase signature 277 290 IPR002318 GO:0000166|GO:0005737
Spst2g02687 974 PRINTS Alanyl-tRNA synthetase signature 358 371 IPR002318 GO:0000166|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02687 Spst-Chr2 26460295 26470831 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02687 K01872 - gmx:100788271 1729.53