Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02671 ATGCCGAAGCCTTGTGACTTGCAAATCAACATTGATGGTCGGCAGATATTTCTTTTGAAAGAGAAGGTTATATCAAAATACTGTGGAGGGTTTAAAAAAATCTTGAATCACCAGAAGAAAAGATGTCATGTGAAGGAGTTGGGGATTAGAATTAACGATTTCCCAGGAGGACCAGAAGGGTTTGAGCTAGTTTCAATGTTCTGTTACAATAATGGAAAAATCCAAATCACTGAAGCTAATGTGTGTCTCCTCTACTGTTGTGCGGTTTATCTTGGAATGACCGAGGAGGTACTCAGCAACAATCTATTGCAACAAACAGAAACTTTTCTTCAGGGAATCTTCTACTGGAAATGGAGTGATATACTCGTGAGTCTCAAGAGTTGCCAGCTGTTTTATAAGTACGCAGATGGCTATGGTCTCTTGGAGAAGATCATTTGTGTCTTAGCCAAGTTTGTCCAGAATTCAGATTCAAACCTCCTCACTTCCTCTCCTTCAGCATCATCATCTTCTTCACCAGAAAACAATTCTGCCCAGAGATTATCTTTTTCATCCAAGAAAACTACCCCAGAGAAAATCAAGTCAAATTTGTCAGGCAAGGCACGGTGGTTTGGAGATTTGGCAACTTTACCAACAAATATCATTGAGAAACTTATCCAGGCTATTGGGGCATACAAAGCTGATAACAAAGATTTAGTCCTCACAAGATTTCTGTTGCATTATCTGAAAATAGCCACTCAAACAAAAGTGATTAACTGCAGAAACAGCAATGAGTACGCTGCTCTCGCAGAAACTGCTACTTACGGGGTCATATCTGTTGGAAAGAGGACCTTTTCTTGCAGAGGCCTTTTTTGGGTTCTAAGGATTGTATCCAAGTGTGGGTTGAGGAAAGATGTTAGAACTGAATTGGAGAAGCTGATTGGTGGAGTGCTTGAGCAAGCTACACTGGATGATCTTCTAGTTTCTGGGCATGACATGGGAGTTTATTATGACGTTAATTTGGTGATAAGATTGGTTAGACTATTTGTTGATATCAATGGTTCTGATGATGGACTGTCTTTACAGAAACTGAGAAGAGTTGGTAGATTAATTGACAAGTATCTGCGAGAGATATCCCCTGACCAGAACCTCAAGATCTCTAAATTTCTTGGAGTAGCAGAATGCTTGCCAGATTCAGCAAGAGATTGTTATGATGGAGTCTACAAAGCCATTGACATCTATCTTGAGTCTCACCCAAGCATCACATTTGAGGAAAGATCGAGGCTGTGTAGATGTCTTAATTACACCAAACTCAGCTTTGAAGCAAGCAAAGATCTGGCCAAGAACCCCCGGATACCTCCAAGGGTTGCAATGCAGGCTCTTATTTGTCAACAATCAAAAGTTCCAACAATTGACTATGTAACTGAGAGTCCAAGAATGAAGCCTTCTCAAATAGTTTTGTACAATGGAAATACCAGAAGCAGCTTCTCCCAAGAGAAGAAAGATACGGAAATAAACATAGAGAAAATGCAATGGGAAGTAATAGAATTGGCCAAATTACACAAGGAAGTCAACGTGTCAAAGTTGCTCTTGCTTAATCATGCTCGGGCATCATCCTCACCAAAATTTTGTTGA 1611 0.4016 MPKPCDLQINIDGRQIFLLKEKVISKYCGGFKKILNHQKKRCHVKELGIRINDFPGGPEGFELVSMFCYNNGKIQITEANVCLLYCCAVYLGMTEEVLSNNLLQQTETFLQGIFYWKWSDILVSLKSCQLFYKYADGYGLLEKIICVLAKFVQNSDSNLLTSSPSASSSSSPENNSAQRLSFSSKKTTPEKIKSNLSGKARWFGDLATLPTNIIEKLIQAIGAYKADNKDLVLTRFLLHYLKIATQTKVINCRNSNEYAALAETATYGVISVGKRTFSCRGLFWVLRIVSKCGLRKDVRTELEKLIGGVLEQATLDDLLVSGHDMGVYYDVNLVIRLVRLFVDINGSDDGLSLQKLRRVGRLIDKYLREISPDQNLKISKFLGVAECLPDSARDCYDGVYKAIDIYLESHPSITFEERSRLCRCLNYTKLSFEASKDLAKNPRIPPRVAMQALICQQSKVPTIDYVTESPRMKPSQIVLYNGNTRSSFSQEKKDTEINIEKMQWEVIELAKLHKEVNVSKLLLLNHARASSSPKFC 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02671 536 MobiDBLite consensus disorder prediction 163 188 - -
Spst2g02671 536 Pfam NPH3 family 202 435 IPR027356 -
Spst2g02671 536 ProSiteProfiles NPH3 domain profile. 200 459 IPR027356 -
Spst2g02671 536 PANTHER OS12G0117600 PROTEIN 4 511 IPR043454 -
Spst2g02671 536 Gene3D Potassium Channel Kv1.1; Chain A 1 112 IPR011333 -
Spst2g02671 536 SUPERFAMILY POZ domain 3 95 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02671 Spst-Chr2 26286630 26289401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02671 6 462 EF-hand Containing Proteins AT3G44820 27.545 7.18e-49 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02671 - - gmx:100808259 879.011