Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02659 ATGGATTATCAGGATGATGGTTTTGGTGCCAATGGCGGGGGAGAGAGCAAGAGAGTGGGGGAAGGGGTTTCTGAGGAGAGTATGGTGGGGTCCGATGGTTTGAAGGGTTTAAATGTAAAGGAGAATTTTCAGGAGGTGGTAGAGCCACGAGAGCAGGTTCATGACCAAGGATCCAAACTCTATCCGGGGGAGGCCGTAGTTGATAAACAGGATGATGCCGCCACTAGAAGTGCATTGACTTCAGTTTTGGTGGATGAAAAAAGTCCAGATGTCGTTCAGGAGCCTGGTTCCTCTAATGAGGCTGTTGGGGCTGATACTGGGCATGGGAAGCTGGGGGAAACTGATGTAATTGCTAATCAGGATTTGGAAAGGGATGGGGTGGGAGTTGATAGTATGCATCTGAATGGTGCTGGTTCTGGAGTGCCTGGAGATGGAGAATTTTTTGATGAGTCTAAAGGTTTTGGGGATTATAATTTGGAGCATAGTGATGGGGGTGGTGGAAAGGAAGAGTCTGGGTTAAATTCCGATTTAGAGGTGTTAGATAAGGAGAATGATGCTATGGTGGATGAATACTCTGGTTTGATAAGTGAGAAGGCTGAAGTTGATGATTCTGTATTCGTGACTCCTAGAGCAAATGGTGGTATAACATTGGATGATATAAGCATAGACAAGGATGACGGTGTTGCTACTGAGGATATTTTCAAATATGAATCCAGTGAGGTCATTCCAGCTGAATGTACTGATGCTGGGCATTTGAAGGAGTGTGACGTTGATCCTAAACTTGGAGATGACGAGATAGAAGTGAAGTTAAATGCTTCGGTTGATTCTTCTGGTGAGATTCAAGATGGTACATGTGAAGAAGTGCATGTCAATTCAGCTCACATGAATTTAAAACAACAGGATGAAGTAACTAGGGATGTGAACAATGATACTTTGGGCGCTGACATAAGCCATGGGGATAGCAATGGTGAAGAAGTGAGTGCCTCAGCCATTCTGAATGCTGAATTAACTGGTTATGGAAATGGTGATGCTGAAGATGAAAGGCCATCCATTTTGGAAAATCCCCCTACTAATGAGACAACGACTATTCAGGAGGCTAGTGCAGCTGATCCAAAGGGAGGAAGTATTAAGGATGATCAATCTCTGATTTCTGATGAAAAGCTTAGGGACGATGACAACACTTCTGTGGTTGAGGAGCCTGAAAGTATACACGAGAAGATTATTCAAGGGACAAAAAGCTCACAAGTAACTGGAGAGCAACTTGTTCAACCTTCAGCAGATATTTCTTCTTCATCTGAAAGGTCTGCTGATACTAGGCTCCCCTCTGCTCGTCCTTCATCTGAAAATTCTACTGGGGCTGGTCCAACTCCTGTTCATCCAGCTGGCCTTGGTCGGGCAGCTCCATTGCTAGAACCTGCATCTAGGGTGGTGCAGCAGCCTCGTGCTAATGGTACCGTGTCTCATGCTCAGGCGCAGCAAATGGAGGACTCCTCAAGTGGGGAGGCTGAGGAGTATGATGAGACACGTGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGTTAGCTCATAGGCTTGGGCAAACTCCCCATAATGTTGTTGTAGCTCAAGTTTTATATAGATTAGGACTAGCTGAGCAACTAAGAGGAAGGAATGGGGGCCGTGTTGGTGCTTTTAGCTTTGACCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCCGCAGGTCAGGAGCCACTTGATTTCTCTTGTACAATAATGGTCCTTGGAAAGACAGGAGTTGGTAAAAGTGCCACGATCAATTCTATTTTTGATGAGGTTAAGTTTAATACCAGTGCTTTTAATATGGGAACCAAGAAGGTTCAGGATGTCGTGGGAACAGTGCAGGGTATTAAGGTACGGGTCATTGATACGCCGGGACTTCTACCTTCCTGGTCAGACCAACGAAGCAACGAGAAGATCCTCCTCTCTGTTAAGCACTTCATTAAGAAAACTCCACCTGATATTGTGTTGTATCTTGATAGGTTAGATATGCAAAGCAGGGATTTTAGTGATATGCCACTCTTACGCACAATAACAGATATTTTTGGGCCATCCATTTGGTTCAATGCCATTGTAGTACTGACTCATGCAGCATCTGCCCCTCCTGAAGGCCCCAATGGTACTGCTTCTAGTTATGACATGTTTGTGACTCAGCGTTCTCATGTTGTGCAGCAAGCCATTCGCCAAGCAGCTGGTGACATGCGTCTCATGAATCCTGTATCCTTGGTAGAGAACCACTCTGCTTGCCGAACTAACAGGGCTGGCCAGAGAGTATTGCCAAATGGCCAGGTTTGGAAACCTCATTTGTTACTTCTATCTTTTGCCTCTAAAATTCTGGCCGAAGCAAATGCTCTTCTTAAGTTACAAGATAGTCCACCTGGAAAGCCTTATATAGCTCGAGCACGGTCGCCTCCGTTACCTTTTCTTTTGTCTACCCTTCTCCAATCCAGACCCCAGTTAAAGCTGCCAGAGGAGCAGTTTGGTGATGAAGATAGTCTTGATGATGACCTTGATGAGGCATCAGAGTCTGAAGATGAAAATGAACATGATGACTTGCCACCATTTAAGCCTTTAACTAAGGCCCAGGTGGAAAAGTTGTCTAAAGCTCATAAGAAAGCATATTTTGATGAGTTAGAGTATAGGGAAAAGCTTTTGATGAAGAAACAATTGAAGGAAGAAAAAAAGCGACGGAAATTGATGAAGAAAATGGCAGAAGCAGCAAAAGATCTGCCCGGTGACTATAGTGAAAATGTGGAAGAAGGTGGTGGTGCAGCTTCTGTTCCTGTCCCCATGCCAGATTTGGCCCTGCCTGCTTCTTTTGATTCTGATAACCCCACTCACCGTTATCGATATCTTGATTCATCAAACCAATGGCTTGTTAGACCTGTTCTAGAAACTCATGGATGGGATCATGATGTCGGTTATGAAGGTTTGAATGTAGAAAGATTGTTCGTTGTCAAGGACAAGGTACCTTTGTCTTTCACGGGTCAGGTCACTAAAGATAAAAAGGATGCTAATGTTCAGATGGAAATAGCTGGCTCAGTTAAGCATGGGGAAGGGAAAGTAACTTCATTAGGTTTTGATATGCAAACTGTGGGGAAGGACTTGGCTTATACATTACGAAGTGAAACAAGATTTACTAATTTTAGAAGAAATAAGGCAACTGCCGGTCTCTCATTTACTTTACTTGGTGATGCCTTATCGGGTGGAGTTAAGATTGAAGACAAATTGGTTGCTAGTAAGCGATTCAAAGTGGTTATCAGTGGTGGTGCAATGGCAGGGCGCAATGACATTGCTTATGGTGGCAGTTTGGAGGCCCAGTTGAGAGATAAAGATTACCCTTTAGGTCGTTTCTTATCTACTCTTGGGCTCTCTGTTATGGATTGGCACGGAGATCTTGCTGTTGGGTGCAATGTGCAATCTCAGATCCCAGTTGGACGACATACAAACCTGGTTGCCCGCGCCAATTTGAACAACCGAGGGGCAGGACAAATAAGTGTTCGATTGAACAGTTCAGAACAGCTTCAAATTGCTTTGGTTGCTCTTATCCCTCTCGTAAAGAAGCTAGTGAGCTATCCTCAACAACTGCAGTATGGACAATATTAA 3645 0.4447 MDYQDDGFGANGGGESKRVGEGVSEESMVGSDGLKGLNVKENFQEVVEPREQVHDQGSKLYPGEAVVDKQDDAATRSALTSVLVDEKSPDVVQEPGSSNEAVGADTGHGKLGETDVIANQDLERDGVGVDSMHLNGAGSGVPGDGEFFDESKGFGDYNLEHSDGGGGKEESGLNSDLEVLDKENDAMVDEYSGLISEKAEVDDSVFVTPRANGGITLDDISIDKDDGVATEDIFKYESSEVIPAECTDAGHLKECDVDPKLGDDEIEVKLNASVDSSGEIQDGTCEEVHVNSAHMNLKQQDEVTRDVNNDTLGADISHGDSNGEEVSASAILNAELTGYGNGDAEDERPSILENPPTNETTTIQEASAADPKGGSIKDDQSLISDEKLRDDDNTSVVEEPESIHEKIIQGTKSSQVTGEQLVQPSADISSSSERSADTRLPSARPSSENSTGAGPTPVHPAGLGRAAPLLEPASRVVQQPRANGTVSHAQAQQMEDSSSGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFNMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWSDQRSNEKILLSVKHFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITDIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYIARARSPPLPFLLSTLLQSRPQLKLPEEQFGDEDSLDDDLDEASESEDENEHDDLPPFKPLTKAQVEKLSKAHKKAYFDELEYREKLLMKKQLKEEKKRRKLMKKMAEAAKDLPGDYSENVEEGGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVKDKVPLSFTGQVTKDKKDANVQMEIAGSVKHGEGKVTSLGFDMQTVGKDLAYTLRSETRFTNFRRNKATAGLSFTLLGDALSGGVKIEDKLVASKRFKVVISGGAMAGRNDIAYGGSLEAQLRDKDYPLGRFLSTLGLSVMDWHGDLAVGCNVQSQIPVGRHTNLVARANLNNRGAGQISVRLNSSEQLQIALVALIPLVKKLVSYPQQLQYGQY 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02659 1214 MobiDBLite consensus disorder prediction 49 112 - -
Spst2g02659 1214 CDD Toc34_like 555 800 - -
Spst2g02659 1214 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 582 1129 IPR045058 -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 128 173 - -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 407 454 - -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 836 870 - -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 841 861 - -
Spst2g02659 1214 Pfam AIG1 family 583 716 IPR006703 GO:0005525
Spst2g02659 1214 FunFam Translocase of chloroplast 120, chloroplastic 555 802 - -
Spst2g02659 1214 Gene3D - 552 800 IPR027417 -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 149 167 - -
Spst2g02659 1214 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 576 717 IPR027417 -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 353 368 - -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 337 465 - -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 480 507 - -
Spst2g02659 1214 NCBIfam chloroplast protein import component Toc86/159, G and M domains 460 1214 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Spst2g02659 1214 Coils Coil 903 923 - -
Spst2g02659 1214 ProSiteProfiles AIG1-type G domain profile. 580 809 IPR006703 GO:0005525
Spst2g02659 1214 Pfam Translocase of chloroplast 159/132, membrane anchor domain 940 1203 IPR024283 -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 1 36 - -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 379 406 - -
Spst2g02659 1214 MobiDBLite consensus disorder prediction 480 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02659 Spst-Chr2 26181507 26185151 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02659 - - gmx:100810931 1885.15