Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02647 ATGGGTGGCAACGAGGATTCCAACAATAAGGGCGATTCTCCATTCGAATCATCGGCATCACAACCCTTTCTATCGAAACCCTCGTACCCTTCTTCGACATCTTCGGCAGTGGAAGAAGAATCCGAGTCAAACCAGCAATACCATCACATCACTTACAATTCAGGTCCTCGCTCCTTCAAGGACCTCCCTTTCCTCATCCTCTTCCTTCTCTTCATCATCTCCACCTTCGCCTTCGGCATCTTCGCCGTCTTCCACCGAAACACCAACTACACCTCTCTCTCATCTTTCTCCTACGACCCCACCTCCTCCTCCTGCGTCCTAAACCCTTCTTCCTCTTCTTCCTCCCTTTCCAACTTGCTTTTCCTCGATTCTTCCTCGCACTTGGTCAAGGGTCTCATATGGACCCTCGTCATCACCTTCGTTCTCAGCATCCCCTTGTGCTGGGCTATGCTTCTCTTACTCAAACATTACACCAAACAGATTGTCTACGCTGCGATTCCCTTCTTCATCGCCATCCCAATTTTCCTCAACGTCTATTGGTTCGTCGCATGCATTCTCGGTGCGACTTGCAGTTCTGCCTTCCCCCTCGCGTACCGGATTCTCGTCATGGTCTTTGTCTTCTTGGTGATTGGGGTCCTCGTGTGGATCTTGGTCGTGAATTGGCATCGCGTGGAGCTCACTGTCAGCATAATTGGGGTCGCTTCCCATGCACTTTCCAGGAATTTGAACTTGTTCGGGGTGCTGCCTTGTTTGATTGTTGGGCTTGTCGTGTATTACGTTCCAATAGTGATTTTCATGGTGTTTGCGAGGTTTAATGGGCAGATTGTGGTGAAGAATTTGGAGCGCGGATATGCTTGTGTGTGGAAGGAAGATTCATGGGTTCCCGCTTATTTTGCTTTAGCTATTCTCACCATGTTGTGGTCTGCGTCAGCTATGGTCGAAGCTCAAGTTTATGTCATCAGTGGCACCATTGCTAATTGGTATTTCTCCAAGGATCATCAAACTCCTAAGCGGAGTATTCGAACTTCTCTCAGAAATGCTTTTGGTCCTTCTTCTGGTACGATATGCTTGTCGGGATTGCTTATCTTTGTTGTTCGAATGGTGCGTTCTGCGGTTGATAGTGCAAGACAAGAGGATATTCCCGGGATAGTGAACCTTGTACTGCGATGCTGTGTGAATGCCTTACTGACAGCAGTTGATTTTCTCAACAAGTTCACCATAAACTTTGCTGCGATAACTGGTGAAGCCTACTGCTCTTCTGCAAGGATGACGTATGAACTTCTAAGACGCAATCTTCTCTCTGCTGTTTTTGTGGAGACCATCTCATCTCGCATTCTGGCTGGGATTGTTTTTGTCTTTTCTGCAACATACACAATAGTGGCCTGTGCTATCTTAAAAGCTGGTACCAATCTTGGGGCTGATTCATATTTTGTGGCTGCGATGGCATGGGTGCTACTGATAGTAGTGCTGGGTTACCTCGTGCATGTGCTAGACAATGTAATCGAAACAATTTACATCTGCTATGCTATAGACCGGGATAGAGGAGAGGTTTGTAAACAAGAAGTTCATGAGGTTTACGTTCACCTACCCATAAGTAGAAGTCTCAGACAGTCTGTTCCCACAAGAACACTAGGTGTGTAA 1641 0.4698 MGGNEDSNNKGDSPFESSASQPFLSKPSYPSSTSSAVEEESESNQQYHHITYNSGPRSFKDLPFLILFLLFIISTFAFGIFAVFHRNTNYTSLSSFSYDPTSSSCVLNPSSSSSSLSNLLFLDSSSHLVKGLIWTLVITFVLSIPLCWAMLLLLKHYTKQIVYAAIPFFIAIPIFLNVYWFVACILGATCSSAFPLAYRILVMVFVFLVIGVLVWILVVNWHRVELTVSIIGVASHALSRNLNLFGVLPCLIVGLVVYYVPIVIFMVFARFNGQIVVKNLERGYACVWKEDSWVPAYFALAILTMLWSASAMVEAQVYVISGTIANWYFSKDHQTPKRSIRTSLRNAFGPSSGTICLSGLLIFVVRMVRSAVDSARQEDIPGIVNLVLRCCVNALLTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRILAGIVFVFSATYTIVACAILKAGTNLGADSYFVAAMAWVLLIVVLGYLVHVLDNVIETIYICYAIDRDRGEVCKQEVHEVYVHLPISRSLRQSVPTRTLGV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02647 546 Pfam Plasma-membrane choline transporter 205 513 IPR007603 GO:0022857|GO:0055085
Spst2g02647 546 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 36 513 IPR007603 GO:0022857|GO:0055085
Spst2g02647 546 MobiDBLite consensus disorder prediction 1 40 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02647 - - gmx:100810591 879.782