Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02640 ATGGAGGCATTGGCTGTCACGGTTACCGTGAGGAGTAATAATAAGGATCGGTTGGAGATGGGTTTCTTTAGTACCATTTTGGGGTTTTTCGGATTTGGGGTTGGGGTTTCGATTGGTCTTGTGGCTGGGTATTTTCTATTCATCTACTTTCAGCCCACTAATGTTGAGGATCCTGAAATCAAGCCATTGGTGGACCAAGAGCAAGAGACTTTGCAGCGGATGTTTCCAGAGATTCCTCTTTGGATAAAAAATCCGGACTTCGATCGGCTTGACTGGCTGAACACGTTTTTTCAGTATATGTGGCCGTATCTCGATAAGGCAATTTGCAAGACTACCAAGAACATTGCAAAACCCATAATTGCTGAGCAGATTCCTAAATACAAAATTGATTCAGTTGAATTTGAAACTCTCACGCTGGGTTCACTGCCGCCAACTTTTCAAGGAATGAAAGTTTATGTGACTGATGAGAAGGAGTTAATTATGGAGCCTTCTATAAAATGGGCGGCAAATCCTAATGTCACTGTTTCTGTTAAAGCATTTGGGTTGAAAGCAACTGTACAGGTTGTGGATTTGCAAGTTTTCCTATTGCCTCGTATTACCTTGAAGCCTTTGGTTCCTAGCTTTCCTTGCTTTGCCAACATATATGTCTCTCTCATGGAAAAGCCACATGTTGACTTTGGGCTAAAGCTCATAGGGGCTGATCTTATGTCTATTCCAGGCGTCTATAGGATTGTTCAGGAGATAATCAAAGATCAGGTTGCAAACATGTATTTATGGCCCAAAACCTTGGAAGTTCCAGTTTTAGATATGTCAAAAGCCTTGAAGAGGCCCGTTGGAATTTTACATGTAAAGGTTCTGCATGCAATGAAACTAAGGAAGAAAGATCTTCTTGGTGCATCTGACCCTTATGTTAAGCTAAAGCTTACTGAGGATAAATTGCCATCGAAAAAGACTACTGTTAAGCATAAGAACTTAAATCCTGAGTGGAATGAAGAATTCAATTTGATAGTTAAAGATCCAGACTCGCAGGTTTTAGAGATTAATGTTTATGACTGGGAGCAGGTTGGAAAACATGACAAGATGGGTATGAATATGATCCCTTTAAAAGAAGTTCCCCCTGAAGAGCCTAAACGTTTTACCCTTGACCTCCTAAAAAACATGGATCCCAATGATGTCCAAAATGAGAAGTCTCGTGGGCAGATTGTTGTAGAATTGACATATAAACCCTTCAAGGAGGAGGATTTGGCCAAGGGGTTTGAAGAAACACAGCAAGTACCGAAGGCTCCTGAAGGTACTCCAGATGGTGGAGGTCTGCTTGTCGTTATAGTCCATGAAGCTCAAGATGTCGAAGGGAAGTATCACACTAATCCACATGTACGACTTATTTTCAGAGGAGAGGAGAAAAAAACTAAGGTAGAGAATCGCAAGAAACCCTACTTCGGACGGGTGGGGCGCATTAAGAAGAATAGAGATCCAAGATGGGAAGATGAGTTCCATTTTATGGTGGAGGAACCTCCCACCAATGATAGATTACACGTGGAGGTTCTCAGCACTTCAGCACGAAACCTGCTCCACCAAAAGGAATCATTGGGTTATATCGACATCAATCTTGGGGATGTTGTTGCAAACAAAAGAATTAATGAGAGGTACCATCTTATAGACTCCAAGAATGGTCGGCTCCAGATCGAGTTGCAGTGGAGAACCTCGCAAGGATGA 1716 0.4207 MEALAVTVTVRSNNKDRLEMGFFSTILGFFGFGVGVSIGLVAGYFLFIYFQPTNVEDPEIKPLVDQEQETLQRMFPEIPLWIKNPDFDRLDWLNTFFQYMWPYLDKAICKTTKNIAKPIIAEQIPKYKIDSVEFETLTLGSLPPTFQGMKVYVTDEKELIMEPSIKWAANPNVTVSVKAFGLKATVQVVDLQVFLLPRITLKPLVPSFPCFANIYVSLMEKPHVDFGLKLIGADLMSIPGVYRIVQEIIKDQVANMYLWPKTLEVPVLDMSKALKRPVGILHVKVLHAMKLRKKDLLGASDPYVKLKLTEDKLPSKKTTVKHKNLNPEWNEEFNLIVKDPDSQVLEINVYDWEQVGKHDKMGMNMIPLKEVPPEEPKRFTLDLLKNMDPNDVQNEKSRGQIVVELTYKPFKEEDLAKGFEETQQVPKAPEGTPDGGGLLVVIVHEAQDVEGKYHTNPHVRLIFRGEEKKTKVENRKKPYFGRVGRIKKNRDPRWEDEFHFMVEEPPTNDRLHVEVLSTSARNLLHQKESLGYIDINLGDVVANKRINERYHLIDSKNGRLQIELQWRTSQG 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02640 571 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 20 566 IPR045050 GO:0008289
Spst2g02640 571 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 86 268 IPR031468 GO:0008289
Spst2g02640 571 Gene3D C2 domain 438 569 IPR035892 -
Spst2g02640 571 CDD C2 281 383 - -
Spst2g02640 571 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 86 267 IPR039010 -
Spst2g02640 571 Pfam C2 domain 279 378 IPR000008 -
Spst2g02640 571 Pfam C2 domain 438 552 IPR000008 -
Spst2g02640 571 PRINTS C2 domain signature 296 308 IPR000008 -
Spst2g02640 571 PRINTS C2 domain signature 323 336 IPR000008 -
Spst2g02640 571 PRINTS C2 domain signature 345 353 IPR000008 -
Spst2g02640 571 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 437 568 IPR035892 -
Spst2g02640 571 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 274 412 IPR035892 -
Spst2g02640 571 FunFam Synaptotagmin-2 isoform A 274 429 - -
Spst2g02640 571 CDD SMP_SYT 79 267 - -
Spst2g02640 571 SMART C2_3c 280 380 IPR000008 -
Spst2g02640 571 SMART C2_3c 438 549 IPR000008 -
Spst2g02640 571 FunFam Extended synaptotagmin-2 438 568 - -
Spst2g02640 571 ProSiteProfiles C2 domain profile. 259 381 IPR000008 -
Spst2g02640 571 ProSiteProfiles C2 domain profile. 421 550 IPR000008 -
Spst2g02640 571 Gene3D C2 domain 275 430 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02640 Spst-Chr2 25971728 25981333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02640 274 548 Lipid Metabolism Gene Families AT3G61300 26.573 9.52e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02640 - - gmx:100803978 1028.47