Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02639 ATGGAAACTCGGAGCCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCCCCTTCCTCTGGTCCCACCACTCGTTCCAGCAAGCGACCGCGTCTCTCTTCTTCTTCCTCTGCTTCCGCCGTCGCCACCGCATCTCTTTCTTCTGTCAACACTCGCTCTCGTGCATCCAGAACTAAGGAACAACCCTTACCTCCGAAGAATCTTCCTCCCATGGACTCTGCCAATGAATCATCTGGTTCCCGCCGTGATCGCCGCAGCAAGGACAACTCCGACAAGGGTAAGGAAAAAGAACACGATGTTAGGATTAGGGACAGAGATGCTGACAGAGGGCTGGCATTGAATATGGATGTTGGTGGTGAGGATGATGATAATGACAGTGAAGGTGGTGTGGGGATTTTGCATCAAAATTTGACCTCTGCGAGTAGTGCACTTCAGGGACTTCTTCGGAAGCTTGGAGCTGGGTTGGATGATCTGCTCCCATCTTCTGCTATGGGTTCTGCATCTTCCTCTCACCAGAATGGAAGGCTGAAAAAGATCCTTTTTGGGTTGCGAGCAGACGGCGAAGAAGGGCGGCAGGTTGAAGCGCTGACGCAACTCTGTGAAATGCTTTCAATTGGTACTGAAGAATCGCTTAGTACATTCTCAGTTGATTCGTTTGTTCCTGTGCTTGTGGGTTTGTTGAATCACGAAAACAATCCCGACATCATGCTTCTTGCTGCCAGAGCATTAACTCATCTATGCGACGTGCTGCCTTCATCATGTGCTGCTGTTGTTCATTATGGTGCAGTGTCAATCTTCTGTGCGAGGTTGCTCACCATAGAATACATGGACTTGGCTGAGCAGTCCCTTCAGGCTCTGAAAAAGATATCTCAAGAGCATCCCACTGCCTGCCTACGAGCAGGTGCTCTTATGGCCGTGCTTTCTTATTTGGACTTTTTTTCTACAGGAGTTCAGCGGGTTGCGTTGTCTACTGCTGCCAATATGTGCAAGAAACTTCCATCAGATGCATCTGATTTTGTGATGGAAGCTGTTCCTCTTCTGACAAACCTTCTTCATTATCATGATGCCAAGGTTCTAGAACATGCCTCTGTTTGTTTGACTCGAATAGCTGAAGCGTTTGCGTCATCTCCTGACAAATTAGATGAATTGTGCAACCATGGACTGGTAACACAAGCTGCCTCCCTCATCTCTAACAGCAGTTCTGGGGGTGGTCAGGCATCTCTCAGCACACCAACATATACTGGTTTAATCCGACTTCTTTCAACTTGTGCGAGTGGATCCCCTCTTGGAGCTAAAACTTTACTACTACTCGGAATTAGTGGTATTCTTAAAGATATTCTATCTGGTTCTGGAGTTTCTTCTAATTCCTCTGTTTCTCCTGCATTAAGTAGGCCCCCGGAGCAGATATTTGAGATTGTAAACCTAGCAAATGAGCTTCTTCCCCCATTGCCACAAGGAACAATTTCTCTCCCTATCATCTCCAACATGTTTTTGAAAGGGCCCATTGTAAGAAAGTCTCCTGCTGGTACCTCTGGGAAACAAGAAGATACAAGTGGAAATGCTCCTGAGATATCAGCCCGTGAGAAACTATTAAATGACCAGCCTGAACTACTTCAGCAATTTGCTATGGATCTTCTCCCTGTTTTAATACAGATATATGGTTCTAGTGTCAATGGTCCTGTTCGGCACAAATGTCTTTCTGTTGTTGGAAAATTGATGTATTTCAGCACAGCAGAGATGATCCAGTCTTTGTTGAGTGTGACGAATATATCAAGTTTCTTAGCTGGTGTGCTAGCATGGAAAGATCCACATGTGTTGGTTCCTGCCTTGAAAATTGCTGAAATTCTTATGGAAAAGCTTCCTGTGACATTTTCCAAGATGTTCATTCGAGAAGGTGTTGTGCATGCAGTGGACCAACTTATTTTACCCGGAAATTCTACCAATATCTCTATACAGGCATCTTCTACTGAGAAGGATAATGATTCTATATCTGGAGCATCATCTCGCTCTAGGCGTTATCGGCGACGCAGTGTAAGTTCCAATCCTGATGGAAATCCTTTGGACGATTTGAAGCCTCCAGTTTCAGTAAATGTTGGTTCGCCTCCAAGTTCTGTGGATATTCCAACAGTAAACTCTACTATTCGTTTGTCTGTTAGTACAGCTGCAAAAGCTTTTAAAGATAAGTACTTTCCTTCGGACCCTGGGGCTTCTGATGTTGGCATTACTGATGATCTTTTGAATCTGAAAAATCTTTGCATGAAGTTAGATGCTGGTGCGGATGAACAAAGGACTAATGGAAAGGGGAAATCTAAATCTTCTGGGTTTGTTCTGGAAGAGTATTTAATTGGGGTCATAGCTGACATGCTAAAGGAACTTGGCAAAGGTGATGGGGTATCTACTTTTGAATTTATTGGTAGTGGTGTTGTTGCAGCTTTGTTGAATTATTTTTCTTGTGGGTACTTCTCTAAAGATAAACCCCTAGATATCCACCTTCCAAAGCTTCGCCAACAAGCACTTACAAGGTTTAAGTTATTTATAGCTGTGGCACTACCTTCCACCACCGAGGTTGGGACTGTGGCTCCTATGACCGTCTTGGTCCAGAAGCTTCAAAATGCCTTGTCTTCCTTGGAGCGTTTCCCTGTCGTGTTGAGTCATTCATCTAGGTCATCTAGTGGGAGTGCACGCCTCTCCTCTGGACTAAGTGCATTATCTCATCCCTTCAAGTTGCGGCTTTGTCGAGCCCAGGGTGAAAAGTCACTTAGGGATTATTCATCCAATGTTGTACTGGTTGATCCGTTGGCAAGTTTAGCAGCCATTGAGGAATTTCTTTGGTCTCGTATCCAACGAAGTGAATCTGGTCAGAAGTCCAATGTACCTGCTGGGCATTCTGAATCGGGGACAACTCCTGCAGGACCTGGTGTATCCTCTCCTTCCACTACCCGTCATCATTCTACTAGATGCAGATCATCTGTTAATATAGGTGACACATTGAGAAAGGATATAACTCAAGATAAAAGCACTAGCTCTTCTAAGGGGAAGGGAAAAGCTGTATTAAAGCCTGCCCAAGAGGAGGCAAGAGGACCTCAAACCAGGAACGCAACTCGCAGAAGGGCAGCTCTTGATAAAGATGCTCCCTTAAAGCCTGTAAATGGTGACTCTACTTCTGAG 3171 0.4538 METRSRKRAEASSAAPSSPSSGPTTRSSKRPRLSSSSSASAVATASLSSVNTRSRASRTKEQPLPPKNLPPMDSANESSGSRRDRRSKDNSDKGKEKEHDVRIRDRDADRGLALNMDVGGEDDDNDSEGGVGILHQNLTSASSALQGLLRKLGAGLDDLLPSSAMGSASSSHQNGRLKKILFGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHENNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDASDFVMEAVPLLTNLLHYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISNSSSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSSNSSVSPALSRPPEQIFEIVNLANELLPPLPQGTISLPIISNMFLKGPIVRKSPAGTSGKQEDTSGNAPEISAREKLLNDQPELLQQFAMDLLPVLIQIYGSSVNGPVRHKCLSVVGKLMYFSTAEMIQSLLSVTNISSFLAGVLAWKDPHVLVPALKIAEILMEKLPVTFSKMFIREGVVHAVDQLILPGNSTNISIQASSTEKDNDSISGASSRSRRYRRRSVSSNPDGNPLDDLKPPVSVNVGSPPSSVDIPTVNSTIRLSVSTAAKAFKDKYFPSDPGASDVGITDDLLNLKNLCMKLDAGADEQRTNGKGKSKSSGFVLEEYLIGVIADMLKELGKGDGVSTFEFIGSGVVAALLNYFSCGYFSKDKPLDIHLPKLRQQALTRFKLFIAVALPSTTEVGTVAPMTVLVQKLQNALSSLERFPVVLSHSSRSSSGSARLSSGLSALSHPFKLRLCRAQGEKSLRDYSSNVVLVDPLASLAAIEEFLWSRIQRSESGQKSNVPAGHSESGTTPAGPGVSSPSTTRHHSTRCRSSVNIGDTLRKDITQDKSTSSSKGKGKAVLKPAQEEARGPQTRNATRRRAALDKDAPLKPVNGDSTSE 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02639 1057 MobiDBLite consensus disorder prediction 1030 1044 - -
Spst2g02639 1057 SUPERFAMILY ARM repeat 177 645 IPR016024 -
Spst2g02639 1057 MobiDBLite consensus disorder prediction 1 108 - -
Spst2g02639 1057 MobiDBLite consensus disorder prediction 10 61 - -
Spst2g02639 1057 MobiDBLite consensus disorder prediction 653 668 - -
Spst2g02639 1057 SMART arm_5 334 372 IPR000225 GO:0005515
Spst2g02639 1057 SMART arm_5 291 331 IPR000225 GO:0005515
Spst2g02639 1057 SMART arm_5 208 249 IPR000225 GO:0005515
Spst2g02639 1057 MobiDBLite consensus disorder prediction 952 998 - -
Spst2g02639 1057 MobiDBLite consensus disorder prediction 952 1057 - -
Spst2g02639 1057 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 10 1057 IPR045322 GO:0006511|GO:0061630
Spst2g02639 1057 Gene3D - 166 484 IPR011989 -
Spst2g02639 1057 FunFam HECT ubiquitin protein ligase family protein KAK 170 484 - -
Spst2g02639 1057 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 219 247 IPR000225 GO:0005515
Spst2g02639 1057 MobiDBLite consensus disorder prediction 653 704 - -
Spst2g02639 1057 MobiDBLite consensus disorder prediction 78 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02639 Spst-Chr2 25962858 25967039 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02639 K10590 - gmx:100783336 1754.57