Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02637 ATGGCAACTCTCAAACTTGTTTTCATTACCTTGCTTTACATCACTGCTTCACTGACCATTGCTTCCTGTGCCAAGGAACAAAAGAATGAGAACACTGATTCCAGCGTAAATGAAGGATCCAAGAAGAAGAAAGTCACTTATGATGGCAGGTCACTCATAATCGATGGAAAACGGGAGCTTCTCTTCTCCGGTTCCGTCCATTACCCTCGAGTTCCCCCAGAGGCGTGGTCATCAATTATTGACAAATCAAGACGTGGAGGTATAAACGTGATTCAAACTTACATCTTCTGGAACGCTCATGAGCCTGAGAAAGGAAAGTTCAAAGTGGACCCAGAGTATGATTTCGTGAAGTTCATGCAGATCTGTCATGATAAAGGACTGTATGTAACCCTCAGGCTTGGGCCTTTCATCCAAGCTGAATGGAATCATGGAGGACTTCCATATTGGCTAAGAGAGGTCCCTGATATCATATTCCGCTCTAACAATGAACCCTTTAAGAAGTACATGAAAGAATATGCAACAACTGTTGTAAAAATGTTGAAAGATGCGAACCTATTTGCTCCCCAAGGAGGCCCCATCATCTTGGCACAGATTGAGAATGAGTACAACCATATCCAACGTGCTTTTAGAGAGGAAGGAGATAATTATGTCCAATGGGCCGCAAATATGGCAGTGTCACTGGATGTTGGAGTTCCATGGATCATGTGCAAGCAAACGGATGCTCCTGATCCAGTGATTAATGCATGCAATGGAAGGCACTGTGGTGATACCTTCTCAGGCCCCAACAAACCCCACAAGCCTGCCCTGTGGACTGAAAATTGGACTGCTCAGTATAGAGTGTTTGGAGATCCACCATCCCAAAGATCAGCAGAAGACATTGCCTTCTCAGTTGCTCGCTTCTTCTCCAAGAATGGGTCTTTGGTGAACTACTATATGTACCATGGTGGAACAAATTTTGGTAGAACAAGCTCTGCCTTCAGTACAACCCGATATTACGATGAAGCACCTCTTGATGAGTTCGGTTTGCCCAGAGATCCAAAATGGTCTCACCTGAGGGACGTGCACAAGGCATTGAACCTATGCAGGAAGGCACTGTTCGGGTGTGGAACTACCGTCACAAAACTGAGCCAGCATCACGAGATTACAGTTTACGAGAGGCCAGGTAGTGACTTATGTTCTGCTTTCATCACTAACAACCACACCAAAACAGCAGCCACCTTAGAATTCAGAGGTTCGAAGTATTATTTGCCACCACGTTCCATTAGTATCCTCCCTGACTGCAAGACTGTGATTGCTTCACAACATAATTCAAGGAACTTCAAGAAGTCAAGCCAAGCAAACAATCACAAGTGGGAGGTGTTTACTGAGAGCATTCCAGACCCCAAGGATATACCAGTTAGTTTAAATGTTCCCATAGAGCTTTATAGCTTGCTTAAAGACACCACCGACTATGCATGGTATACCACCAGCTTTAAATTGACTCCGGAAGACTTGTCAAAGAAGAATGAGATAACCCCCGTTCTTCGTATTATGAGTCTTGGCCATTCATTGCTTGCCTATGTAAATGGAGAATTCATTGGATCAAATCATGGTACTCACGAAGAGAAAGGGTTTGAACTACAGAAAGCTGTAAAGTTGAAGGAAGGAGTTAACACGATAGCTATCTTGGCTAGTACTGTTGGACTCCCCGACAGTGGAGCTTACATGGAGCACAGGTATGCTGGACCCAAGTCTATACAAATCCTTGGTCTTAACTCTGGAAAAGTTGATCTGACTTACAATGGTTGGGGTACCAAGGTTGGTATCCAAGGTGAGGAGCTTAGCATTTTCACTGAGAAGGGATCAAAGAATGTACAATGGCAACAGGTCCAGGGAACTGGAAAGACTCTCTCCTGGTACAAGACAAGTTTTTCAACCCCAGAGGGAAGGGATCCTGTTGCCATAAAGATGACTGGTATGGGGAAGGGAATGGTTTGGATCAATGGTAAAAGCATTGGTCGTCATTGGATGAGCTTCCTCTCTCCCCTTGGAACTCCTACTCAATCAGAGTACCACATCCCAAGATTTTTCCTCAATCCAACTGACAACTTGCTTGTTGTATTTGAGGAAGAGAAAGCAAACCCAAAAGATATTGAGATCGTAACTGTTGACAGAGATACAATATGCAGTGTGATCACAGAGAATCACCCCGCACACATAAGCTCATGGGAATCTAAGGGTGGGAAGTTCCAGTCTGTTGTTCAAAATCCAGTGCCATCAGCTACACTCTCATGTCCACTCTTCAAAACCGTGAAGGCCGTGGAGTTTGCAAGCTTTGGTGATCCTACGGGTATCTGTGGAGACTTTGTCATGGGAAAATGTGATGCACCTACAACTAAGCAGCTTGTTGAACAGCATTGCCTGGGAAAAAATTCATGCAATGTTCCATTTGACAAGGCAACCTTCACTCAGGGCAAGGATGCTTGCCCAGAAGTGATGAAGATACTTGCAATCCAACTCAAGTGTGACTTCTAG 2514 0.4451 MATLKLVFITLLYITASLTIASCAKEQKNENTDSSVNEGSKKKKVTYDGRSLIIDGKRELLFSGSVHYPRVPPEAWSSIIDKSRRGGINVIQTYIFWNAHEPEKGKFKVDPEYDFVKFMQICHDKGLYVTLRLGPFIQAEWNHGGLPYWLREVPDIIFRSNNEPFKKYMKEYATTVVKMLKDANLFAPQGGPIILAQIENEYNHIQRAFREEGDNYVQWAANMAVSLDVGVPWIMCKQTDAPDPVINACNGRHCGDTFSGPNKPHKPALWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSKNGSLVNYYMYHGGTNFGRTSSAFSTTRYYDEAPLDEFGLPRDPKWSHLRDVHKALNLCRKALFGCGTTVTKLSQHHEITVYERPGSDLCSAFITNNHTKTAATLEFRGSKYYLPPRSISILPDCKTVIASQHNSRNFKKSSQANNHKWEVFTESIPDPKDIPVSLNVPIELYSLLKDTTDYAWYTTSFKLTPEDLSKKNEITPVLRIMSLGHSLLAYVNGEFIGSNHGTHEEKGFELQKAVKLKEGVNTIAILASTVGLPDSGAYMEHRYAGPKSIQILGLNSGKVDLTYNGWGTKVGIQGEELSIFTEKGSKNVQWQQVQGTGKTLSWYKTSFSTPEGRDPVAIKMTGMGKGMVWINGKSIGRHWMSFLSPLGTPTQSEYHIPRFFLNPTDNLLVVFEEEKANPKDIEIVTVDRDTICSVITENHPAHISSWESKGGKFQSVVQNPVPSATLSCPLFKTVKAVEFASFGDPTGICGDFVMGKCDAPTTKQLVEQHCLGKNSCNVPFDKATFTQGKDACPEVMKILAIQLKCDF 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02637 837 ProSiteProfiles SUEL-type lectin domain profile. 752 836 IPR000922 GO:0030246
Spst2g02637 837 CDD Gal_Rha_Lectin_BGal 749 835 - -
Spst2g02637 837 PANTHER BETA-GALACTOSIDASE RELATED 35 741 IPR001944 GO:0004553|GO:0005975
Spst2g02637 837 FunFam Beta-galactosidase 598 722 - -
Spst2g02637 837 Pfam Galactose binding lectin domain 756 835 IPR000922 GO:0030246
Spst2g02637 837 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 190 202 IPR019801 GO:0004553|GO:0005975
Spst2g02637 837 Pfam Beta-sandwich domain in beta galactosidase 370 431 IPR041392 -
Spst2g02637 837 SUPERFAMILY Galactose-binding domain-like 421 576 IPR008979 -
Spst2g02637 837 Gene3D - 598 728 - -
Spst2g02637 837 Gene3D Glycosidases 41 361 - -
Spst2g02637 837 SUPERFAMILY Galactose-binding domain-like 593 742 IPR008979 -
Spst2g02637 837 FunFam Beta-galactosidase 41 361 - -
Spst2g02637 837 Gene3D - 745 837 IPR043159 -
Spst2g02637 837 SUPERFAMILY (Trans)glycosidases 44 361 IPR017853 -
Spst2g02637 837 Gene3D - 436 577 - -
Spst2g02637 837 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Spst2g02637 837 PRINTS Glycosyl hydrolase family 35 signature 628 642 IPR001944 GO:0004553|GO:0005975
Spst2g02637 837 PRINTS Glycosyl hydrolase family 35 signature 55 72 IPR001944 GO:0004553|GO:0005975
Spst2g02637 837 PRINTS Glycosyl hydrolase family 35 signature 306 321 IPR001944 GO:0004553|GO:0005975
Spst2g02637 837 PRINTS Glycosyl hydrolase family 35 signature 655 671 IPR001944 GO:0004553|GO:0005975
Spst2g02637 837 PRINTS Glycosyl hydrolase family 35 signature 76 94 IPR001944 GO:0004553|GO:0005975
Spst2g02637 837 PRINTS Glycosyl hydrolase family 35 signature 325 341 IPR001944 GO:0004553|GO:0005975
Spst2g02637 837 PRINTS Glycosyl hydrolase family 35 signature 131 150 IPR001944 GO:0004553|GO:0005975
Spst2g02637 837 PRINTS Glycosyl hydrolase family 35 signature 188 203 IPR001944 GO:0004553|GO:0005975
Spst2g02637 837 PRINTS Glycosyl hydrolase family 35 signature 269 284 IPR001944 GO:0004553|GO:0005975
Spst2g02637 837 Pfam Glycosyl hydrolases family 35 51 357 IPR031330 -
Spst2g02637 837 Pfam Beta-galactosidase jelly roll domain 618 700 IPR025300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02637 Spst-Chr2 25949609 25954172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02637 44 835 Glycoside Hydrolase AT2G16730 58.603 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02637 - - gmx:100780092 1343.95