Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02635 ATGGCATCCAAGAGAATACTGAAGGAGCTCAAGGACTTACAGAGAGATCCACCAACTTCATGCAGTGCAGGTCCTGTAGGTGAGGACATGTTCAACTGGCAAGCAACCATCATTGGTCCAAATGACAGTCCTTATGCTGGTGGTGTTTTCCTCGTCATCATCCATTTCCCTCCTGATTATCCCTTCAAACCTCCCAAGCCGTACACATAG 210 0.4762 MASKRILKELKDLQRDPPTSCSAGPVGEDMFNWQATIIGPNDSPYAGGVFLVIIHFPPDYPFKPPKPYT 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02635 69 Gene3D Ubiquitin Conjugating Enzyme 1 68 IPR016135 -
Spst2g02635 69 SUPERFAMILY UBC-like 1 66 IPR016135 -
Spst2g02635 69 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 2 66 - -
Spst2g02635 69 CDD UBCc 3 66 IPR000608 -
Spst2g02635 69 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 69 IPR000608 -
Spst2g02635 69 Pfam Ubiquitin-conjugating enzyme 5 66 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02635 Spst-Chr2 25938203 25938639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02635 2 65 Miscellaneous Gene Families AT3G17000 45.312 2.16e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02635 K06689 - gmx:100787053 113.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02635 2 25938203 25938639 Spst2g02635 2 25938203 25938639 ECH