Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02628 ATGGCCATTCAAGCGCACTGGTATCCAAATAATTCTGCTTCTCCATTCTTGAACAATGGTTATTGTTCTGCTGGCTTCATTGACTCTGGCATCAGTTTTCAGCAGAAACATCATCATCAACAACAACAGCTAGCACAACAGCATTTGAGAGAGTTATGCGATGGGAGTCAGGGAACTGTTGATCCAAATCTTTCAAAAGCGTTGAATTCTCCTATGCTCGCTATTCAGTTTGAGAAACAATGGGAAGAGATTGATCAGTACATCAAATCTGAGGATGAGAAATTGAGATATATGATACAAGAGCATGGGAAACAGCAGGTAATAGCATTGCTGAAGAAACTGGAAATTCGTTCACTTCATATCCTGAGGGAAAAAGATGAAGAAATTGCGCTAGCCATGAAGAAAAGGTTGGAGTTGGAAGAGTACTTAAGAAGGCTAGAGGCGGAAAACAGCAAGTGGCAGAGGTTGGCTCAGGAGAAGGAAACCATGGCATTGTCCCTGTACAAAACTCTGGAGGAAATGGCAGAAGGTGGCAATTTTTTAAACACTGGGGCAGTGGTAAATGATGCAGTGTCCTGTTGTGGCGAAACTGGGGGAATAGAAGAGATGGAAGAAGAAGCAACAGCAGAAAAAGGTTTAGAATGTGGTGGAGTGAGTGAGCTTGAACAGATTACGAGAAGAGGAGGGGTAATGCTTTGTAAAAGCTGTCATTCTAGGAGCTCGTGCTTTCTTTTCCTCCCATGCAGGCACCTTTCTTCCTGCAAAGTTTGTAACGCTTCCCTCGAGGCTTGCCCCGTTTGCAGAACACCAAAGAAGGCTACCATTGAGTTGAGACTCTGA 840 0.4381 MAIQAHWYPNNSASPFLNNGYCSAGFIDSGISFQQKHHHQQQQLAQQHLRELCDGSQGTVDPNLSKALNSPMLAIQFEKQWEEIDQYIKSEDEKLRYMIQEHGKQQVIALLKKLEIRSLHILREKDEEIALAMKKRLELEEYLRRLEAENSKWQRLAQEKETMALSLYKTLEEMAEGGNFLNTGAVVNDAVSCCGETGGIEEMEEEATAEKGLECGGVSELEQITRRGGVMLCKSCHSRSSCFLFLPCRHLSSCKVCNASLEACPVCRTPKKATIELRL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02628 279 Coils Coil 129 163 - -
Spst2g02628 279 ProSiteProfiles Zinc finger RING-type profile. 233 268 IPR001841 -
Spst2g02628 279 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 202 277 IPR013083 -
Spst2g02628 279 PIRSF SBP1_RNase_bind 27 279 IPR017066 -
Spst2g02628 279 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 50 276 IPR017066 -
Spst2g02628 279 Pfam Zinc finger, C3HC4 type (RING finger) 232 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02628 Spst-Chr2 25897733 25898665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02628 232 269 Miscellaneous Gene Families AT2G21380 42.105 5.85e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02628 K19042 - gmx:100789863 380.948