Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02616 ATGGGTTTTCGTTTACCTAGTATCAGAAAAGCATCTGCAAACCAAGTTTCTTCAAAAGTTGTGGATGTGCCAAAGGGCTACCTAGCGGTGTATATTGGAGAGAAGATGAAGCGGTTCCTGATACCTGTATCGTACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCTGAGGAAGAATTTGGGTACGATCATCCGATGGGTGGTCTCACAATTCCTTGCAGAGAAGACGTGTTCCTAGATACTATTTCTAGCTTGAATAGGTGTTAG 273 0.4212 MGFRLPSIRKASANQVSSKVVDVPKGYLAVYIGEKMKRFLIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCREDVFLDTISSLNRC 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02616 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 87 IPR003676 GO:0009733
Spst2g02616 90 Pfam Auxin responsive protein 13 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02616 Spst-Chr2 25822738 25823010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02616 22 80 Calmodulin-binding Proteins AT3G43120 55.932 1.30e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02616 K14488 - gmx:100795597 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02616 2 25822738 25823010 Spst2g02616 2 25822738 25823010 ECH