Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02588 ATGAAGGAATGGAGGACGCTGTTCCATGTTGCGGTGTTTGCGGCGGTGTTGACCGGAATGGGAAGCAGCCACGACTACGGGGACGCATTGTCGAAGGCCATTATTTTCTTCGAGGGACAGCGATCGGGATTCCTGCCGCAGGATCAGAGAGTGAGTTGGCGAGGGAACTCCGGTCTCAGTGACGGCTGGAACTACAACACAGATCTCACTGGCGGCTACTACGACGCCGGTGACAACGTGAAATTTGGGTTTCCGATGGCCTTCACCACCACAATGCTGGCATGGAGCGTGCTGGAATTCGGTGACGTCATGCCTCCCAATGAGCTCAGGAACTCCCTCCTCGCAATTCGTTGGGCCACTGATTATCTTCTCAAGACTGTTTCTCAGCCAAATCGGATTTTCGTTCAGGTGGGTGATCCAAACTCCGATCACGGTTGTTGGGAGAGGCCAGAGGACATGGATACAGCGAGGACTACATATGCTATTGATGCACCGAACGCCGCTTCTGATGTCGCCGGCGAAACGGCCGCCGCACTAGCAGCCTCGTCCATGGCGTTCCGGTCATCGGACCCTGGTTATTCGGAGACATTGCTTCGAAATGCTGTTACTGCCTTTGAATTTGCAGATAACTACAGGGGTGCTTACAGTGACAATGATAATGTTAAATATAATGCCTGCCCATATTACTGTGATTTTGATGGCTATCAGGATGAGTTGTTATGGGGAGCCGCATGGCTAAGGAGGGCGACACAGGACGATAATTTCCTGGACTACATTCAAAGCAATGGTAAAACTCTTGGTGCCGATGACAACATCAATGAATTTGGTTGGGACAACAAGCATGCTGGCCTTAATGTACTTGTCTCCAAGGAAGTGATAGAAGGAAAGATATACTCTCTTGAGTCCTACAAGTCCTCAGCAGAGAGCTTCATTTGCACACTGATACCCGAATCACCAAGCTCACACATAGACTACACACCAGGTGGACTTGTGTACAGACCCGGAGGCAGCAACTTGCAACATGCTACTTCAATTGCTTTCCTCGAATTGGTGTATGCCAATTACCTAACACACACTTCAGAAGCCATCACTTGTGGCAATGTCTATGTCAGTGCACAAACTCTTCGCCAACATGCTAAGAGGCAAGTTGATTACATTTTGGGTGATAACCCAATGGGACTGTCCTACATGGTTGGCTACAGCAACTACTATCCTCAACGTATTCACCACCGTGCCTCTTCTTTACCCTCAATCAAGGATCATCCCCAGTTCATTGCCTGCAAAGAAGGTTCAATCTACTACAATTCAACAAATCCAAATCCTAATGTACTTGTTGGTGCTATTGTTGGAGGACCTGACGAAAACGATGATTATCTGGATGATCGAGCTGATTTTAGGAAATCTGAACCAACAACTTACATTAATGCCCCATTTGTTGGGGTGTTAGCATATTTTGCTGCAAATCCCAACTTTATTAGTTGA 1482 0.4791 MKEWRTLFHVAVFAAVLTGMGSSHDYGDALSKAIIFFEGQRSGFLPQDQRVSWRGNSGLSDGWNYNTDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVLEFGDVMPPNELRNSLLAIRWATDYLLKTVSQPNRIFVQVGDPNSDHGCWERPEDMDTARTTYAIDAPNAASDVAGETAAALAASSMAFRSSDPGYSETLLRNAVTAFEFADNYRGAYSDNDNVKYNACPYYCDFDGYQDELLWGAAWLRRATQDDNFLDYIQSNGKTLGADDNINEFGWDNKHAGLNVLVSKEVIEGKIYSLESYKSSAESFICTLIPESPSSHIDYTPGGLVYRPGGSNLQHATSIAFLELVYANYLTHTSEAITCGNVYVSAQTLRQHAKRQVDYILGDNPMGLSYMVGYSNYYPQRIHHRASSLPSIKDHPQFIACKEGSIYYNSTNPNPNVLVGAIVGGPDENDDYLDDRADFRKSEPTTYINAPFVGVLAYFAANPNFIS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02588 493 PANTHER ENDO-1,4-BETA-GLUCANASE 14 487 - -
Spst2g02588 493 SUPERFAMILY Six-hairpin glycosidases 23 488 IPR008928 GO:0005975
Spst2g02588 493 Gene3D - 22 488 IPR012341 GO:0005975
Spst2g02588 493 Pfam Glycosyl hydrolase family 9 26 482 IPR001701 GO:0004553|GO:0005975
Spst2g02588 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 458 476 IPR033126 -
Spst2g02588 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 385 411 IPR018221 -
Spst2g02588 493 FunFam Endoglucanase 22 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02588 Spst-Chr2 25623789 25627602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02588 1 488 Glycoside Hydrolase AT1G70710 58.248 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02588 K01179 - gmx:100101849 956.051