Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02579 ATGGCGTTCAAACTCAAATCACTACCTTTTCCTTTCTCTCTTCACTCCTCTCCCCGCCAAAACCCTAATCTCACACTTCCAAACCATTGTCTTCCTCGTCGTTTCGCTGCACCTTCCCTTCCTCTCAGTCTCTGCCTATCAAGCACAGCCTCAGCATCCAACTTTCATCGCACTGCCTTCGTAACCGCTCGTGCATTTCGAAGTGATGAACTCGCTGAAGGAGGCGAAGAGGACAAAGAGGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTAGCGAATCAAGGGATATGGAGTCAGATGAAGGAAATTGTAATGTTTACCGGTCCTGCAACCGGACTTTGGATATGTGCACCACTTATGAGTCTCATCGATACTGCAGTTATTGGTCAGAGAAGCTCTATTGAGCTTGCTGCTCTAGGTCCTGCTACTGTTGTTTGTGATTACATGAGCTACGTGTTCATGTTTCTATCAATTGCCACTTCCAATATGGTTGCCACTGCCCTTGCTAAACAGGACAAAGAAGAAGTGCAACACCACATATCTGTCTTGCTTTTTGTTGGTTTATCTTGTGGCATTGCGATGCTTTTGTTCACAAGGTTTTTTGGTGCTGCAATAATAACTGCTTTCATCGGGCTAAAGAATGCACACATAGTACCTGCAGCCAGCAGTTATGTAAAGATTCGAGGCTTGGCATCACCTGCTTTACTTGTTGGATGGGTTGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCCTGGGGACCCTTGAAAGCTTTGGCTGTTGCTAGTTTTATAAATGTAACTGGTTGTATAATTTTGTGCATCTGTTTAGGCTACGGTATTGTAGGAGCAGCGTGGGCTACAATGGTTTCACAAGTTGTTGCTGCTTTCATGATGATTCAAACTCTAAACATGAAGGGATATAATGCACTTGCCTTCTCCATTCCTTCAGGGAAGGAACTTTTGACTATATTTGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCACTACTTATATATTTTGCTACATCAATGGGTACACATACTATGGCTGCTCATCAAGTCATGGTCCAAACATATTCCATGTGTACAGTATGGGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGAATTGATATATGGAGCAAATCGGAGTTTGTCAAAGGCTCGATTGCTTCTAAGGTCTCTTGTGATAATTGGAGTTATACTTGGATTATTGTTAGGGATTGTTGGAACATCAGTTCCTTGGTTATTTCCCTACATTTTTACACCTGATCGGATGATCATCCACGAGATGCATAAGGTGCTGATTCCGTACTTTATAGCCCTCGCTGTAACACCCCCCACTATCAGCCTCGAAGGAACATTGCTGGCTGGGCGGGATCTGAGATTTATTAGTTTGTCAATGACTGGATGCTTTTGTGTTGGTTCACTAGTATTATGGGCCTTCAGTACTAGATTTGGTTTGCTAGGCTGCTGGTTTTCCCTCGCAATATTTCAATGGGCTCGGTTTTCAATGGCCCTCCAGCGCCTGCTTTCTCCCAAGGGCATTTTATACTCAGAAGATACAGACCAGTATGAGCTGCTAAAGCTAAGGACTGCCTAG 1635 0.4385 MAFKLKSLPFPFSLHSSPRQNPNLTLPNHCLPRRFAAPSLPLSLCLSSTASASNFHRTAFVTARAFRSDELAEGGEEDKEEEISRQGEKKELANQGIWSQMKEIVMFTGPATGLWICAPLMSLIDTAVIGQRSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKEEVQHHISVLLFVGLSCGIAMLLFTRFFGAAIITAFIGLKNAHIVPAASSYVKIRGLASPALLVGWVAQSASLGMKDSWGPLKALAVASFINVTGCIILCICLGYGIVGAAWATMVSQVVAAFMMIQTLNMKGYNALAFSIPSGKELLTIFGLAAPVFMTMMSKVAFYSLLIYFATSMGTHTMAAHQVMVQTYSMCTVWGEPLSQTAQSFMPELIYGANRSLSKARLLLRSLVIIGVILGLLLGIVGTSVPWLFPYIFTPDRMIIHEMHKVLIPYFIALAVTPPTISLEGTLLAGRDLRFISLSMTGCFCVGSLVLWAFSTRFGLLGCWFSLAIFQWARFSMALQRLLSPKGILYSEDTDQYELLKLRTA 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02579 544 Pfam MatE 116 270 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g02579 544 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 74 526 IPR044644 -
Spst2g02579 544 CDD MATE_DinF_like 100 514 IPR044644 -
Spst2g02579 544 NCBIfam MATE family efflux transporter 110 503 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02579 Spst-Chr2 25549325 25554278 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02579 K03327 - gmx:100778295 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02579 2 25549325 25554278 Spst2g02579 2 25549325 25554278 ECH