Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02577 ATGGCTTTCAAACTCAAATCACTACCTCTTCCTTCCTCTCTTCACTCCGCTCCCCGCCAAAACCCTAATTTCAAACTTTCAAACCTCCGTCTTCCTCGTCGTTTCTCCGCACCTTCCCTTCCTCCCACTCTCTGTCTCTTAACTGCAGCCTCAGCATCCACATTTCATCGGTCTGCCTTCGCAACCGCTCGCGCATTTCGAAGCGATGAACTCGCTGACGAAGGCGAAGAGGAAAAAGAAGATGAAATATCGAGGCGCGGTGAGAAAAAGGAACTAGCGACTCAAGGGATATGGGGTCAGATAAAGGAAATTGTGATGTTTACGGGTCCAGCAACCGGACTTTGGATATGTGCACCACTTATGAGTCTCATCGATACTGCAATTATTGGTCAGAGAAGCTCCATTGAACTTGCTGCTCTAGGTCCGGCTACTGTTGTTTGTGATTACATGAGCTACGTCTTCATGTTTCTATCAATTGCCACTTCCAATATGGTTGCCACTGCCCTTGCTAAACAGGACAAACAAGAAGTACAACATCACATATCTATCTTGGTTTTTGTTGGGTTATCATGTGGGGTTGTGATGCTTTTGTTCACAAGGCTATTTGGTGCTGCAATAATAACTGCTTTCACTGGGTCAAAGAATGCACACATAGTACCAGCAGCTAGCAGTTATGTAAAGATCCGAGGCTTGGCATGGCCTGCTTTGCTTGTTGGATGGGTTTCTCAAAGTGCAAGTCTTGGTATGAAAGATTCCTTGGGACCCTTGAAGTCTTTGGCTGCTGCTACTGTTATAAATATCATTGGTTGCATAGTTTTGTGCAACTGGTTAGGCTATGGAATTGTAGGGGCAGCGTGGGCTACAATGATTTCACAAGTTGTTGCTGCTTACATGATGATTCAAACTCTTAACAAAAAGGGATATAATGCACTTGCGTTCTCCATTCCTTCAGGGAAGGAACTTCTGATGATATTTGGGCTTGCTGCTCCTGTATTTATGACAATGATGTCAAAGGTGGCTTTCTACTCACTGCTTATATATTTTGCTACATCAATGGGTACACATACAATGGCTGCACATCAAGTCATGGTCCAAACATATTCCATGTGTACTGTATGGGGTGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGAATTGATATATGGAGTAAATCGGAGTTTGTCAAAGGCCCAATTGCTTCTAAGGTCTCTTTTAACTATCGGAGTCATACTTGGATTATTGTTAGGGATTGTTGGAACATCAGTTCCTTGGTTATTTCCATACATTTTCACACCTGATCGGATGGTCATTCAGGAGATGCATAAGGTGCAGATTCCATACTTTATAGCGCTGTCTATAACCCCCCCTACCCACAGCCTCGAGGGAACGTTGCTGGCTGGGCGGGATCTGAGATTTATAAGTTTGTCAATGACTGGATGCTTTTGCGTGGGTTCAATAGTATTATGGGCCATGAGTAGTAGATTTGGTTTACTAGGCTGCTGGTTTTCCCTCGCAATATTTCAATGGGCTCGGTTTTCAATTGCCCTGCAGCGCCTTCTTTCTCCCAAGGGCATTTTATACTCGGGAAATACAGGCCAGCAGAAGCTAAGAAAGCTAACCACTTAG 1632 0.4424 MAFKLKSLPLPSSLHSAPRQNPNFKLSNLRLPRRFSAPSLPPTLCLLTAASASTFHRSAFATARAFRSDELADEGEEEKEDEISRRGEKKELATQGIWGQIKEIVMFTGPATGLWICAPLMSLIDTAIIGQRSSIELAALGPATVVCDYMSYVFMFLSIATSNMVATALAKQDKQEVQHHISILVFVGLSCGVVMLLFTRLFGAAIITAFTGSKNAHIVPAASSYVKIRGLAWPALLVGWVSQSASLGMKDSLGPLKSLAAATVINIIGCIVLCNWLGYGIVGAAWATMISQVVAAYMMIQTLNKKGYNALAFSIPSGKELLMIFGLAAPVFMTMMSKVAFYSLLIYFATSMGTHTMAAHQVMVQTYSMCTVWGEPLSQTAQSFMPELIYGVNRSLSKAQLLLRSLLTIGVILGLLLGIVGTSVPWLFPYIFTPDRMVIQEMHKVQIPYFIALSITPPTHSLEGTLLAGRDLRFISLSMTGCFCVGSIVLWAMSSRFGLLGCWFSLAIFQWARFSIALQRLLSPKGILYSGNTGQQKLRKLTT 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02577 543 Pfam MatE 116 271 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g02577 543 NCBIfam MATE family efflux transporter 110 503 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst2g02577 543 CDD MATE_DinF_like 102 523 IPR044644 -
Spst2g02577 543 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 65 526 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02577 Spst-Chr2 25541770 25547339 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02577 K03327 - gmx:100778835 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02577 2 25541770 25547339 Spst2g02577 2 25541770 25547339 ECH