Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02549 ATGGCGGCCACCGTGATGCTCCTCCGGTCGCTTGCCCGCAACTTCATTCCCCCGGAGCTCCACCGCTACCTCCACTCCAAACTCTCCAAATTCATCTCCTACTTCTCCTCCGAACTCACCCTCGTCATGGAAGAGTTCCACGGGTTCACTCCAAACCCGCTCTTCGCCGCGGCGCAGCTCTACCTCAAGCCGCACGCAGCGCCAAATACGAAACGCTTCCGCGCCATGAAGCCTGCGAAATCGCACCACGTATCCCTTGTCATGGACCGCAACGACGAGATGACGGACTCCTTCAACGGCGTGCCGTTTCGGTGGAGGCTTGTGTCCCGGCGCGTCCCCTCGAAATCGGTCTACCGCGGGGAGGCCTGCTCGGAATACCATATGCAGTTCTTCGAGCTGCGGTTCAACAAGAAGCACCAGGAGATGGTTCTGTCGGAGTATTTACCGCGGGTGATGAAGGAGGCGGAGGCGGCGCGAGAGAGGAGGAAGACGCTGAGGCTCTTCACGGTGAAGGACATGCGGATGAGAGGGAGGGGGGAGTTATGGCAGGGCGTGAATCTGGAGCACCCTGCGACGTTGGAAACGGTGGCGATGGATTGGGAATTGAAGGAGATGATAATTGGGGATTTGGATAGGTTTGTAGAGAGGAAGGGTTTATATAAGAGTGTTGGGAAGACGTGGAAGAGAGGGTATTTGCTTTCGGGTCCCCCTGGTACTGGGAAATCGAGTTTGATTGCTGCTATGGCCAATTACCTGAATTTTGATGTGTATGACTTGGAACTCACTGCCGTTACACGAAACTCTGAGCTCAGGAGGTTGTTGATTGCGACCAGGAATCGTTCCATTCTTGTTGTGGAGGACATTGATTGTTCCCTTGATTTGCAGAATAGGCTTCTTGCAAAACCTAAAACATCACACCGCTTTATCCCACCCCATTATTTTGACAGTCCAAAACCCCAGGTGACATTATCGGGCTTCCTGAATTTCATTGATGGCTTGTGGTCTAGTCGTGGGGATGAGAGGATAATAGTGTTCACCACGAATCACAAGGACAAATTGGACCCTGCTCTTCTGCGCCCTGGGCGTATGGATGTGCACATTGACATGACTTACTGCACCCCAGGTGGGTTCAAAATGCTGGCTTCCAATTACTTTGGGATCACACAGCACCCACTTTTTGTTCAAATTGAGAAGTTGCTGGGGACGACCAATGTCACTCCTGCGGAGGTGGGGGAACAGTTTTTGCAGAATGAAGAACCGGAGACTGCACTCCAAAGCCTGATGGAGCTCCTTCTTGAGAAGGAACGAAATCATGAAATGAAGATGAAAGCACCTCTCACCATTCACTGA 1350 0.5244 MAATVMLLRSLARNFIPPELHRYLHSKLSKFISYFSSELTLVMEEFHGFTPNPLFAAAQLYLKPHAAPNTKRFRAMKPAKSHHVSLVMDRNDEMTDSFNGVPFRWRLVSRRVPSKSVYRGEACSEYHMQFFELRFNKKHQEMVLSEYLPRVMKEAEAARERRKTLRLFTVKDMRMRGRGELWQGVNLEHPATLETVAMDWELKEMIIGDLDRFVERKGLYKSVGKTWKRGYLLSGPPGTGKSSLIAAMANYLNFDVYDLELTAVTRNSELRRLLIATRNRSILVVEDIDCSLDLQNRLLAKPKTSHRFIPPHYFDSPKPQVTLSGFLNFIDGLWSSRGDERIIVFTTNHKDKLDPALLRPGRMDVHIDMTYCTPGGFKMLASNYFGITQHPLFVQIEKLLGTTNVTPAEVGEQFLQNEEPETALQSLMELLLEKERNHEMKMKAPLTIH 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02549 449 PANTHER BCS1 AAA-TYPE ATPASE 2 437 - -
Spst2g02549 449 Gene3D - 368 435 - -
Spst2g02549 449 ProSitePatterns AAA-protein family signature. 341 359 IPR003960 GO:0005524|GO:0016887
Spst2g02549 449 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 411 IPR027417 -
Spst2g02549 449 Gene3D - 183 367 IPR027417 -
Spst2g02549 449 SMART AAA_5 227 373 IPR003593 GO:0016887
Spst2g02549 449 Pfam Domain associated at C-terminal with AAA 16 108 IPR025753 -
Spst2g02549 449 CDD RecA-like_BCS1 206 369 - -
Spst2g02549 449 Pfam ATPase family associated with various cellular activities (AAA) 232 369 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02549 Spst-Chr2 25189175 25190639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02549 193 369 Miscellaneous Gene Families AT2G29080 28.649 1.98e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02549 K08900 - gmx:100789716 661.373