Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02544 ATGGTGGCTGGGCTCTGTGGCCAAAATCTGGATTGGAACTTCAAAGTACAAGGTTTTGGGATTTGGTTAGCTTTTTGCAAGGAATTGAACTGTTGCACCTCATTACCATCTGGGGTATCTGAAGTTCAGGTTTTTCTTAGTACTGTGGCAATCAAAATGGTGTCTGCTTGTGTGACCTTGAAAGTCAATACCCAATTTGTAAACTCGAGAAAAGACAATACTTTTCGTCAAGATGGTGGTTTTTTAGGTGAGAGAATCAAAGGGAGTCTTAATTACAGTCCCTGGATCACTAACCGATTGGCCTCAAGTTTGAGAACCCAGGAGAGGGTGAAGAAGACCAAACCCGGTGTTGTTTCTGCTGTTCTTACGTCAAGTACTACCAAAGAATCAGTGGCCTTTCAAATGCCTTCGTTTCTCAGAAGAAAAGCTGACCCAAAAAATGTTGTTTCCATCATATTGGGAGGGGGTCCCGGCATTCAACTGTTTCCTCTTACCAAACGAGCTGCCACACCTGCTGTTCCTGTTGGTGGATGTTACAGGCTTATAGACATCCCAATGAGCAACTGCATCAACAGTGGCCTCAACAAAATATTTGTATTGACCCAATTCAACTCTGCATCCCTCAACCGTCACATCTCCCGCACCTATTTTGGAAACGGAATCAACTTTGGGGATGGATGCGTGGAGGTTCTGGCGGCTACTCAAACACCAGGAGAAGCTGGAAAGAAATGGTTCCAAGGAACCGCAGATGCTGTGAGGCAATTTACATGGGTATTTGAGGATGCCAAAAACACAAACATTGAGAACGTGTTAATCTTGGCCGGAGATCATCTATACCGAATGGATTACATGGACCTTGTGCAGAGTCACGTTGAAAGAAATGCAGATATTACAGTATCATGTGCTGCTGTAGGTGACAGCCGTGCATCAGATTATGGATTGGTCAAGGTAGATGGCAGAGGTCGCATCATCCACTTTTCAGAAAAACCCAAGGGTCCTGATCTGAAAGCAATGGAAGTAGATACTTCTGTTTTCGGGTTGTTAACCCATGAGGAAAAAAAAACACCATATATTGCATCGATGGGGGTTTATGTATTCAAGACGGATGTTTTACTTAAAATTTTGAAATGGAGATATCCTACGTCCAATGACTTCGGATCTGAAATTATTCCTGCAGCTGTGAGGGAACACAATGTCCAAGCGTATTTTTACGATGACTATTGGGAAGACATTGGAACAATTAAATCATTTTACGATGCTAACTTGGCTCTTACTGAAGAGAATCCAATGTTCAAATTTTATGATCCCAAAACACCCATTTACACATCCCCAAGATTCCTACCACCAACAAAGATTGACAAATGCCGGATTGTTGATGCAATAATTTCCCATGGATGTTTCCTAAGAGAATGTACCGTTCAACGTTCCATTGTGGGCGAACGTTCACGTTTGGATTATGGTGTTGAGCTCCAGGACACTGTAATGATGGGAGCTGACTATTACCAAACTGAATCCGAAATTGCTTCTCTGCTGGCAGAGGGGAAGGTTCCCATTGGGATCGGAAGGAATACCAAAATTAGGAACTGCATAATTGACAAGAATGCAAAGATAGGGAAAGATGTCATCATCATGAACAAAGATGGAGTTCAAGAAGCAGATAGACCAGAAGATGGATTTTACATTCGATCAGGAATAACAGTCATATTGGAGAAGGCAACAATAGAAGATGGCACTGTCATATAA 1743 0.424 MVAGLCGQNLDWNFKVQGFGIWLAFCKELNCCTSLPSGVSEVQVFLSTVAIKMVSACVTLKVNTQFVNSRKDNTFRQDGGFLGERIKGSLNYSPWITNRLASSLRTQERVKKTKPGVVSAVLTSSTTKESVAFQMPSFLRRKADPKNVVSIILGGGPGIQLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGLNKIFVLTQFNSASLNRHISRTYFGNGINFGDGCVEVLAATQTPGEAGKKWFQGTADAVRQFTWVFEDAKNTNIENVLILAGDHLYRMDYMDLVQSHVERNADITVSCAAVGDSRASDYGLVKVDGRGRIIHFSEKPKGPDLKAMEVDTSVFGLLTHEEKKTPYIASMGVYVFKTDVLLKILKWRYPTSNDFGSEIIPAAVREHNVQAYFYDDYWEDIGTIKSFYDANLALTEENPMFKFYDPKTPIYTSPRFLPPTKIDKCRIVDAIISHGCFLRECTVQRSIVGERSRLDYGVELQDTVMMGADYYQTESEIASLLAEGKVPIGIGRNTKIRNCIIDKNAKIGKDVIIMNKDGVQEADRPEDGFYIRSGITVILEKATIEDGTVI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02544 580 Gene3D Hexapeptide repeat proteins 446 580 - -
Spst2g02544 580 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 101 580 IPR011831 GO:0005978|GO:0008878
Spst2g02544 580 SUPERFAMILY Trimeric LpxA-like enzymes 442 580 IPR011004 -
Spst2g02544 580 CDD LbH_G1P_AT_C 448 574 - -
Spst2g02544 580 CDD ADP_Glucose_PP 151 411 - -
Spst2g02544 580 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 134 445 IPR029044 -
Spst2g02544 580 FunFam Glucose-1-phosphate adenylyltransferase 130 445 - -
Spst2g02544 580 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 244 252 IPR005836 GO:0005978|GO:0008878
Spst2g02544 580 NCBIfam glucose-1-phosphate adenylyltransferase 148 544 IPR011831 GO:0005978|GO:0008878
Spst2g02544 580 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 359 369 IPR005836 GO:0005978|GO:0008878
Spst2g02544 580 SUPERFAMILY Nucleotide-diphospho-sugar transferases 146 541 IPR029044 -
Spst2g02544 580 Pfam Nucleotidyl transferase 150 426 IPR005835 GO:0009058
Spst2g02544 580 FunFam Glucose-1-phosphate adenylyltransferase 446 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02544 Spst-Chr2 25082942 25089554 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02544 K00975 - gmx:100808791 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02544 2 25082942 25089554 Spst2g02544 2 25082942 25089554 ECH