Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02541 ATGGAAGGAACTGGAGGCAGCAGTGCCTCGGCTGCTGCACCCGTGAACCAATGGTGGCAGGAATTGGCGAAGCTATTTCAATATTATCTGGATAAATCCACACCACATGCTACGTATAGATGGATTGGGAGTTTGGTTGTTGTGGCAATCTTTGTTTTGCGGGTTTTTTATGTCCAAGGATTTTACATCGTGTCTTATGGATTGGGAATCTACCTACTGAATCTATTGATTGGGTTTCTGTCACCGTTGGTCGATCCTGAGCTGGAGCCCTCTGATGGACCATTGCTGCCGACTAAAGGTTCTGACGAGTTCAAACCGTTCATTCGCCGACTGCCTGAGTTTAAGTTCTGGTATTCTTTCACAAAGGCTTTCTGCATAGCATTTGTGATGACTTTCTTTTCTGTATTTGATGTTCCTGTCTTCTGGCCAATATTACTCTGTTATTGGGTTGTTCTGTTTGTTCTTACAATGAGGCGCCAACTTGCACACATGATCAAATACAAATACATACCATTCAACATTGGAAAGCAGAAGTATACTGGCAAAAAATCTTCCGCAAGTAGCAGTGGCAGTCGTGCAGACTGA 585 0.4376 MEGTGGSSASAAAPVNQWWQELAKLFQYYLDKSTPHATYRWIGSLVVVAIFVLRVFYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPELEPSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQLAHMIKYKYIPFNIGKQKYTGKKSSASSSGSRAD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02541 194 PIRSF AtER_Rer1p 1 190 IPR004932 GO:0016020
Spst2g02541 194 PANTHER PROTEIN RER1 6 187 IPR004932 GO:0016020
Spst2g02541 194 Pfam Rer1 family 18 180 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02541 Spst-Chr2 25056460 25058400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02541 1 194 Miscellaneous Gene Families AT2G21600 77.949 1.95e-112 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02541 - - pvy:116129582 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02541 2 25056460 25058400 Spst2g02541 2 25056460 25058400 ECH