Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02540 ATGGGGAAAGCGAAGGGGAAGCACCGTTTGGACAAGTACTATCACTTAGCGAAAGAGCATGGTTACAGGTCTCGAGCTTCATGGAAGCTGGTCCAGCTTAACTCTAAGTTCCAATTCCTCGAGTCCGCGCGCGCGGTCCTCGACCTCTGCGCCGCCCCCGGTGGCTGGATGCAGGTGGCGGTGCAGCGAGTCCCCGTCGACCACCTCGTCATCGGCGTGGACCTGGCGCCCATCGCCCCCATCCGCGGTGCCATCGCCATTCAGGAAGACATCACTAAAACCGAGTGCAAGTCCCGCATCAAGAAGCTCATGAACGAGCGCGGATGTCGCGCCTTTGACGTCATTTTGCACGATGGCTCTCCCAACGTCGGTGGCGCCTGGGCTCAAGAAGCCATGAGCCAGAACGCCCTCGTCATCGATGCGGTCAAGTTAGCCACTCAGTTCTTAGCTCCCAAGGGCATCTTTGTCACCAAAATTTTCAGGTCGCAAGATTACAGCTCCGTGGTGTATTGCTTGAAGCAGTTATTTGAGAAGGTTGAGGTGGACAAGCCTGCGGCAAGTCGATCTGAATCTGCTGAGATATATGTTTTGGGGCTTAGGTACAAGGCTCCTGCCAAGATTGATCCGCGACTTCTTGATGTGAAGCATCTCTTCCAGGGATCTGTGGAACCACAGCCTAAGGTGGTGGATGTACTGAGAGATACTAAGCAGAAAAGGCATCGTGACGGCTATGAAGATGGAAATACAACCTTAAGGAAGATGTCTTCAGCTTCAAATTTCATTTGGTCAGATTCTCCTCTGGAGATCCTTGGTTCAGTCACTTCTATAACCTTTGCTGATGCAGCCGATTTACCAATCAAGGATCATGATCTAACAACTGAAGAGGTCAAATCACTCTGCGATGATTTAAGGGTTTTGGGGAAGCAAGATTTCAAGCATCTTCTAAAGTGGAGGATTCACATTAGAAAAGCTCTTTCACCAACTCAAAAGCCTGATCCTACCACTAAAGAACAGATGGAAAATGAGCTGAAGGTGGATGAAGAAGATAGATTACTCAATGAAATGGAGGAACTGACTAATGTGATGGACCGAAAGAAGAAACGTGCAAAGAAGCTTCTTGCTAAAAGAAGAGCCAAGGACAAGGCACGAAAAGCAACAGGGATGCAAATTGATGCAACAGATGACGGTTACGTAGATGAGGAGTTGTTTTCTCTTTCCTCTATAAAGGGTAAGAAAGATCTGGTAGCTGTTGACAACACTGAGTATGAGGGTGACGATTGTGATTTAGAAGATAGTGAGAATGAAAGAAACCATGAAGGCCCAGAGCATTCATCCAGTGACTTAGAAGATTCTGATGAGGAGCGTAAAAGATACAATGAACAAATGGAAGATTTGCTGGATAAAGCTTATGAGCGTTTTGTGATCAGAAAGGAAGGAAGTACAAAGCAGCGGAAGAGAATTAAAAAATCCTATGAAGCAGAGGCCCAACTTTTGGAGAGTGGTGAGGATGTTGATATTGTTCAATCCATGTATGATTCCGATGAAGATCAGGGTGAGCAAGAAGCAAATCCACTGCTGGTGCCACATCATGACGGGGCAGAACTCACCCAAGAGGAGATCATGAATAAGTGGTTTAGTCAGGATGTCTTTGCTGAAGCTGCAGAGGAAGGAGACTTTGAGAAGGATGAGAGTAAAGATGAAATGGATATAGATGACGAGCCTAAGGCGAAGACATCCATAGCCAAAAAGGTTAAAGAAAATAAAACGGCAGCTCCAGTAGTGGTAGATCATCCTCAACCGCAAGCATCCAAGACAGCAGCAGATGATTTTGAAGTAGTTCCTGTGCCTGCCACCGATTCAAGTGATGATTCATCATCTGATGAATCAGAGGAAGATATTGAAACCAAAGCTGAGATATTGGCTTATGCTAAGAAGATGATGAGGAAAAAACAACGGGAACGGATATTGGATGATGCATATAACAAGTACATGTTTGATGATGAGGGATTACCCAAGTGGTTTCTAGATGAAGAGAAGAGACACCGTCAACCAATAAAGCCTATTTCGAAAGAGGAAATTGCTGCAATGAGAGCGCAATTTAAAGAAATTGATGCCCGGCCTGCGAAGAAGGTGGCAGAGGCCAAAGCACGGAAAAAGCGTGTTGCAATGAGGAAGCTTGAGAAGGTACGGAAGAAGGCGAATGCCATATCAGATCAGACAGAGATATCTGATCGTTCCAAGAGGAAGCAAATTGAACAACTGTATAAGAAGGCTGCTCCGAAGAGGCCTAAAAAGGAATATGTAGTTGCAAAGAAAGGTGTACAAGTAAAGACTGGGAAGGGAAAAGTCCTTGTTGATCGCAGAATGAAGAAGGATGCTAGGAAACGCGGAATGAGTAAGGCAGGTAAAGGAGGTTCCAGGGTGAAGGGCAAGAATCCAAAGGGCAAAGGACCTTCAAAGGCCTCCGCTGCAAAAAATGGAAAACAGAGATCTAAAGGAAAATAG 2505 0.4599 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLNSKFQFLESARAVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLAPIAPIRGAIAIQEDITKTECKSRIKKLMNERGCRAFDVILHDGSPNVGGAWAQEAMSQNALVIDAVKLATQFLAPKGIFVTKIFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLRYKAPAKIDPRLLDVKHLFQGSVEPQPKVVDVLRDTKQKRHRDGYEDGNTTLRKMSSASNFIWSDSPLEILGSVTSITFADAADLPIKDHDLTTEEVKSLCDDLRVLGKQDFKHLLKWRIHIRKALSPTQKPDPTTKEQMENELKVDEEDRLLNEMEELTNVMDRKKKRAKKLLAKRRAKDKARKATGMQIDATDDGYVDEELFSLSSIKGKKDLVAVDNTEYEGDDCDLEDSENERNHEGPEHSSSDLEDSDEERKRYNEQMEDLLDKAYERFVIRKEGSTKQRKRIKKSYEAEAQLLESGEDVDIVQSMYDSDEDQGEQEANPLLVPHHDGAELTQEEIMNKWFSQDVFAEAAEEGDFEKDESKDEMDIDDEPKAKTSIAKKVKENKTAAPVVVDHPQPQASKTAADDFEVVPVPATDSSDDSSSDESEEDIETKAEILAYAKKMMRKKQRERILDDAYNKYMFDDEGLPKWFLDEEKRHRQPIKPISKEEIAAMRAQFKEIDARPAKKVAEAKARKKRVAMRKLEKVRKKANAISDQTEISDRSKRKQIEQLYKKAAPKRPKKEYVVAKKGVQVKTGKGKVLVDRRMKKDARKRGMSKAGKGGSRVKGKNPKGKGPSKASAAKNGKQRSKGK 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02540 834 MobiDBLite consensus disorder prediction 431 457 - -
Spst2g02540 834 MobiDBLite consensus disorder prediction 553 634 - -
Spst2g02540 834 MobiDBLite consensus disorder prediction 754 771 - -
Spst2g02540 834 Gene3D Vaccinia Virus protein VP39 19 208 IPR029063 -
Spst2g02540 834 MobiDBLite consensus disorder prediction 793 814 - -
Spst2g02540 834 MobiDBLite consensus disorder prediction 568 584 - -
Spst2g02540 834 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 803 IPR028589 GO:0008649|GO:0031167
Spst2g02540 834 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 335 - -
Spst2g02540 834 MobiDBLite consensus disorder prediction 754 834 - -
Spst2g02540 834 MobiDBLite consensus disorder prediction 422 457 - -
Spst2g02540 834 Pfam FtsJ-like methyltransferase 22 200 IPR002877 GO:0008168|GO:0032259
Spst2g02540 834 Coils Coil 348 375 - -
Spst2g02540 834 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 6 202 IPR015507 GO:0001510|GO:0008168
Spst2g02540 834 Pfam Domain of unknown function (DUF3381) 235 383 IPR024576 -
Spst2g02540 834 Coils Coil 448 468 - -
Spst2g02540 834 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 21 202 IPR029063 -
Spst2g02540 834 MobiDBLite consensus disorder prediction 553 567 - -
Spst2g02540 834 Pfam Spb1 C-terminal domain 605 797 IPR012920 GO:0005634|GO:0006364|GO:0008168
Spst2g02540 834 FunFam AdoMet-dependent rRNA methyltransferase SPB1 19 208 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02540 K14857 - gmx:100790741 1375.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02540 2 25049323 25054125 Spst2g02540 2 25049323 25054125 ECH