Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02513 ATGCTCTTATGGGTGGTGGAAACTGAACTCTTTAGACAAACCACCATGGTTACACATTCCAACCCTTCACTCCTCCTCCACCTTTCCCTCGTCACCACTGCAATGTACTTTGCTGTTTCGCAACCCTTCATCGGCGTGAACTACGGCCAGGTCGCCGACAACATTCCGGCGCCGGAGGCCTCGGCTGAGCTTCTCAAGTCTACGACCATTGGAAAAGTTCGTCTATACGGCGCCGATCCGGCGTTCATCAAGGCGCTAGCGAACTCCGGAATCGGAATCGTCATCGGCGTGGCCAACGGCGACATTATGAGTTTGGCCTCTGATCCCGACTCGGCGACTCAGTGGGTTAACGCGAACGTGTTGCCACATTACCCCGAGAGCAACATCACTCTGATCACCTTGGGCAACGAGATCATGAGCTCCGGCGACGAGGGCCTCGTCTCGCAAGTTCTCCCGGCAATGCAAAATGTCCAGAATGCCCTCGACTCGGCCTCACTCGGCGGCAAAATAAAAGTTTCCACCGTGCATTCAATGGCCATTTTGACTCAGTCGGAGCCTCCCTCGGCCGGGTCGTTCGACCCGGGTTTCATGGATATCCTCCAACCGTTGGTAGCGTTTCTGAAGAATAACGAGTCACCTTTTGCCATCAATCCATACCCGTTCTTCGCTTACCAGAGCGACCCGAGACCCGAAACTCTCGCATTTTGTCTATTCCAACCAAATTCGGGTCGGGTCGATAAGGGTAGCGGAAAGATTTATTCCAACATGTTCGACGCTCAGGTGGATGCTGTGCACACTGCTTTGAGCAATATAGGGTTCGGGGACATTGAGATTGTGATTGCTGAGACAGGATGGCCCTCTCGTGGGGACACCAATGAAGTAGGAGCCACTGTTGAAAACGCCAGGGCCTACAATGGAAACCTCATTGCACACCTCAGATCAATGGTTGGCACTCCTTTCATGCCTGGAAAATCTGTGGACACATTCATTTTTGCACTCTATGATGAGGATTTGAAACCTGGTCCAGCATCTGAGAGAGCATTTGGCCTGTACAAAGCTGATCTTACCATGGCATATGATGTTGGCCTAGACAAGTCTAGCTCTAACCATAAGAATCCACCAACTAGTCCTGAAAGGGAAACACAGTGGTGCATCCCAAAAGTGGAAGTGAGTGAGGCTCAATTGCAGACAAATATTGATTATATTTGTGCTAGCCAAGTTATAAATTGTGGACCAATTCAACCAGGAGGTGCTTGTTATGAACCTAACACAGTATTATCTCATGCTGCCTTTGCCATGAATCTCTACTACCAAAAGGTTGGAAGAAATCCATGGAACTGTGATTTCTCTCAAACAGCAATGCTTACATCTCAAAATCCAAGTTACAATGCTTGTGTTTATGTTGGTGGAAGTACCTGA 1419 0.494 MLLWVVETELFRQTTMVTHSNPSLLLHLSLVTTAMYFAVSQPFIGVNYGQVADNIPAPEASAELLKSTTIGKVRLYGADPAFIKALANSGIGIVIGVANGDIMSLASDPDSATQWVNANVLPHYPESNITLITLGNEIMSSGDEGLVSQVLPAMQNVQNALDSASLGGKIKVSTVHSMAILTQSEPPSAGSFDPGFMDILQPLVAFLKNNESPFAINPYPFFAYQSDPRPETLAFCLFQPNSGRVDKGSGKIYSNMFDAQVDAVHTALSNIGFGDIEIVIAETGWPSRGDTNEVGATVENARAYNGNLIAHLRSMVGTPFMPGKSVDTFIFALYDEDLKPGPASERAFGLYKADLTMAYDVGLDKSSSNHKNPPTSPERETQWCIPKVEVSEAQLQTNIDYICASQVINCGPIQPGGACYEPNTVLSHAAFAMNLYYQKVGRNPWNCDFSQTAMLTSQNPSYNACVYVGGST 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02513 472 Gene3D Glycosidases 43 372 - -
Spst2g02513 472 ProSitePatterns Glycosyl hydrolases family 17 signature. 276 289 IPR000490 GO:0004553|GO:0005975
Spst2g02513 472 Gene3D - 378 468 - -
Spst2g02513 472 FunFam glucan endo-1,3-beta-glucosidase 7 378 468 - -
Spst2g02513 472 SMART X8_cls 382 467 IPR012946 -
Spst2g02513 472 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 35 456 IPR044965 GO:0004553|GO:0005975
Spst2g02513 472 Pfam Glycosyl hydrolases family 17 44 361 IPR000490 GO:0004553|GO:0005975
Spst2g02513 472 Pfam X8 domain 382 454 IPR012946 -
Spst2g02513 472 FunFam Glucan endo-1,3-beta-glucosidase 14 42 369 - -
Spst2g02513 472 SUPERFAMILY (Trans)glycosidases 44 361 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02513 Spst-Chr2 24746662 24750491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02513 40 467 Miscellaneous Gene Families AT2G16230 63.721 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02513 - - gmx:100778892 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02513 2 24746662 24750491 Spst2g02513 2 24746662 24750491 ECH