Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02511 ATGGCTCAACCACTCGTGAAGAAGGACGATGACCGCGACGACGAAGGTGCTTATTTCATTCTCATGCTTTTCTCTCTCGCAATTCGATCTGCTCTTTGTTTGTGCAAATGCTCTGCGTCTAGCTCTCTATTTGTTGCCACTGCGGGATCACTCTCTCTCGCATCCAGATCCAATGTTCAATTTCCCTTTCCCATTGCAAATGTGGTAGGGTTTGCACAGATCATGATGATCATTAATAATTCGCAAATTGCAATTGCTTCTGAGTATTCTCCCTTTTTGGGAATTGAAAAGGGAGCTGTTCTTCAGGAGGCCAGGGTTTTTAATGACCCGCAATTAGATGCTAGGAGATGTTCACAGGTCGAAGCCACAGAAGTTTTCTTTGCTGTGACTAAGCTTTTCCAGTCTCGAGATCTTGGGTTAAGGAGAATGGTCTACCTAATAATAAAGGAACTTTCCCCCTCTGCGGATGAGGTTATTATCGTTACAAGCTCCCTCATGAAGGACATGATTAGTAAGACTGATATGTACAAGGCTAATTCTATTCGTGTCCTTTGTCGCATCACAGATGGAACACTCCTCACCCAAATTGAGCGATATCTTAAACAAGGAATTGTGGATAAGAATCCAGTTGTTGCAAGTGCAGCCTTAGTTAGCGGCATTCATCTGCTCCAGACAACTCCAGAGATTGTAAAAAGGTGGAGCAATGAGGTTCAGGAAGCTGTTCAGTCAAGGGCAGCTCTTGTGCAATTTCATGCACTAGCATTGCTGCATCAGCACAATGGTGGCACTATTACACCATCATGGAATGGCACCCTACCATTCCTCCAATGGTGGTTGCATTGCATTGTCCCTGGTCAGAGAGGTGCAGAGAGGTTCATTTTACAGCTAAAATTGCAGTCTAAACAGATACGGCAGAATGATCGACTAGCTGTTAGCAAGCTGGTTACCAGCTTGACCAGGGGAAATGTTCGCTCTCCTTTGGCCCAATGCCTTTTAATCCGTTATACAAGTCAGGTAATTAGGGAGTCAGGAAATAATACACAATCAGGAGACCGCCCCTTCTATGATTATCTTGAGAGTTGCCTTCGTCACAAGTCAGAAATGGTGATTTTTGAAGCAGCCAGGGCAATTACAGAGCTCAATGGAGTAACTAGCCGAGAATTAACTCCAGCAATTACAGTTCTTCAGCTCTTCTTAAGTTCATCTAAGCCAGTCTTGAGATTTGCTGCTGTCCGCACCTTGAACAAGGTGGCGATGACACATCCAATGGCAGTCACTAACTGCAATATTGACATGGAAAGTTTAATCTCTGACCAGAACAGAAGCATTGCCACACTTGCCATCACTACTCTACTGAAGACAGGAAATGAATCTAGTGTGGACCGTCTTATGAAGCAGATTACAAATTTCATGTCTGATATTGCTGATGAATTCAAAATTGTTGTTGTCGAAGCAATAAGATCACTGATGAATTTCCTAAGTAATATTCTTAGGGAAGAAGGTGGTTTTGATTACAAGAAAGCAATTGTAGATTCAATTGTGATTCTTATTAGAGATATCCCTGATGCCAAGGAAAGTGGGTTGCTTCATCTTTGTGAGTTTATTGAAGATTGTGAATTCACTTATTTGTCCACACAGATTCTGCACTTCTTGGGAGTTGAAGGGCCGAAAACATCTGACCCCAGCAAATATATTCGTTATATTTATAACAGAGTACATCTTGAGAATGCGACTGTTAGGGCCAGTGCTGTTAGCACAATGGCAAAGTTTGGTGCAGCTGTTGATGCATTAAAGCCCCGCATATTTGTACTGCTAAGGCGGTGTCTTTTTGACAGTGACGATGAGGTTCGCGACCGAGCAACACTTTATTTGAACACACTTGGAGGTGACGGTGGAGTTGTTGAGACAGATAAAGATGTGAAAGATTTCCTCTTTGGGTCATTTGATATCCCACTTGTCAATCTGGAGACTAGTTTGAAAAACTTTGAGCCTTCAGAAGAGGCTTTTGACATTAATTCAGTGCCCAGGGAGGTTAAATCTCAACCTCTTGCAGAGAAAAAAGCCTCTAGTAAAAAGCCTACCGGTTTGGGTGCTCCTCCTAGTGGTCCCTCATCTACTACCGATTCATATGCAAGACTGCTTCAATCCATTCCCGAGTTTGTAAACTTTGGGAAGCTTTTTAAGTCTTCAGAACCTGTGGAGCTTACTGAAGCGGAGACGGAATATGCAGTTAATGTTGTCAAACACATTTTTGATAGGCATGTCGTGTTTCAATACAACTGCACAAACACAATACCAGAACAATTATTGGAAGATGTTATTGTAATTGTGGATGCATCGGAAGCAGAAGAGTTCTCTGAGGTGTTCTCAAAACCTCTTAGATCTCTTCCTTATGATTCACCTGGCCACATATTTGTGGCTTTTGAGAAGCCCGAGGGATTGCCAGTTGCTGGAAAATTTTCTAATGTTCTGAAATTTATTGTTAAAGAGGTTGACCCGACCACTGGTGAGGCAGAAGATGATGGTGTTGAGGATGAATACCAGCTAGAGGATATGGAGGTTGTCACATCAGACTACATATTGAAAGTGGGGGTGTCTAATTTCAGAAGTGCATGGGAAAGCATGGGTCCTGACTGTGAGCGCGTGGACGAATATGGTCTTGGTCCCAGGGAGAGTTTGGCTGAAGCTGTAAATGCTGTCGTCAATCTTCTCGGTATGCAGCCTTGTGAGGGAACCGAGGTAGTCCCCCCCAATTCAAGGTCACACACATGCTTGTTGTCAGGTGTATTCATAGGAAATGTGAAGGTGCTTGTGCGGTTGTCTTTTGGACTTGATGGTCCAAAGGATGTTGCGATGAAACTGTCTGTCAGATCCGAGGATGAAACTGTCAGCGACACCATCCATGAGATTGTGGCTAGCGGCTAG 2925 0.4345 MAQPLVKKDDDRDDEGAYFILMLFSLAIRSALCLCKCSASSSLFVATAGSLSLASRSNVQFPFPIANVVGFAQIMMIINNSQIAIASEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVEATEVFFAVTKLFQSRDLGLRRMVYLIIKELSPSADEVIIVTSSLMKDMISKTDMYKANSIRVLCRITDGTLLTQIERYLKQGIVDKNPVVASAALVSGIHLLQTTPEIVKRWSNEVQEAVQSRAALVQFHALALLHQHNGGTITPSWNGTLPFLQWWLHCIVPGQRGAERFILQLKLQSKQIRQNDRLAVSKLVTSLTRGNVRSPLAQCLLIRYTSQVIRESGNNTQSGDRPFYDYLESCLRHKSEMVIFEAARAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLMNFLSNILREEGGFDYKKAIVDSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGVEGPKTSDPSKYIRYIYNRVHLENATVRASAVSTMAKFGAAVDALKPRIFVLLRRCLFDSDDEVRDRATLYLNTLGGDGGVVETDKDVKDFLFGSFDIPLVNLETSLKNFEPSEEAFDINSVPREVKSQPLAEKKASSKKPTGLGAPPSGPSSTTDSYARLLQSIPEFVNFGKLFKSSEPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLEDVIVIVDASEAEEFSEVFSKPLRSLPYDSPGHIFVAFEKPEGLPVAGKFSNVLKFIVKEVDPTTGEAEDDGVEDEYQLEDMEVVTSDYILKVGVSNFRSAWESMGPDCERVDEYGLGPRESLAEAVNAVVNLLGMQPCEGTEVVPPNSRSHTCLLSGVFIGNVKVLVRLSFGLDGPKDVAMKLSVRSEDETVSDTIHEIVASG 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02511 974 Pfam Adaptin N terminal region 301 627 IPR002553 GO:0006886|GO:0016192|GO:0030117
Spst2g02511 974 Pfam Adaptin N terminal region 122 258 IPR002553 GO:0006886|GO:0016192|GO:0030117
Spst2g02511 974 Gene3D - 856 972 IPR012295 -
Spst2g02511 974 PANTHER COATOMER SUBUNIT GAMMA 1 258 IPR017106 -
Spst2g02511 974 SUPERFAMILY ARM repeat 119 627 IPR016024 -
Spst2g02511 974 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 857 971 IPR032154 -
Spst2g02511 974 Gene3D Coatomer, gamma subunit, appendage domain 702 855 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Spst2g02511 974 Pfam Coatomer gamma subunit appendage platform subdomain 709 854 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Spst2g02511 974 MobiDBLite consensus disorder prediction 679 708 - -
Spst2g02511 974 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 859 971 IPR009028 GO:0006886|GO:0016192|GO:0030117
Spst2g02511 974 FunFam Coatomer subunit gamma 856 972 - -
Spst2g02511 974 FunFam Coatomer subunit gamma 431 628 - -
Spst2g02511 974 SUPERFAMILY Clathrin adaptor appendage domain 704 858 IPR013041 -
Spst2g02511 974 Gene3D - 94 263 IPR011989 -
Spst2g02511 974 Gene3D - 296 414 IPR011989 -
Spst2g02511 974 FunFam Coatomer subunit gamma 702 855 - -
Spst2g02511 974 PIRSF Gamma-COP 298 972 IPR017106 -
Spst2g02511 974 PIRSF Gamma-COP 80 261 IPR017106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02511 Spst-Chr2 24729557 24738823 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02511 K17267 - gmx:100789362 1531.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02511 2 24729557 24738823 Spst2g02511 2 24729557 24738823 ECH