Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02509 ATGGAGGAGAAACGCCGCGACGCCCCTTCCTCCGCCGCAGATTCCCCGGCATCAGAGCCCGCCTCACGCCGCCGCGCCGGAACCAACAAGCGCAAGTCCGCAGCCCTCAGCGCCTCCGGTTCCTCCTCTGCCCCCTCCAAACGTGCCCCTCGCGACAAGCCCTCGCCCTTCCACCCTCCTCCCCTCCACAATGGCCCCCTCACCCGCGCCCGCCAAACCCCCAACTCCCTCGCCGCAGCCTCCTCTTCCGCTGCTGCTTCTGCTCCCCCAGCCGTCAAACACTCCGAACGTACCCACCCATCTGCTGCCGACTCCGCCGCGCTCGCCGAACAGCTCAGGAAGGAGAGCGAGTGGGAGACTCTGGAGGCCGCGATTGAAGCGGAATTCGAAGCTATCAGATCTCGCGGTGCCAATGCGCACGTGGTTCCCACTCATTGCGGTTGGTTTTCATGGTTGTATATTCATGAAATTGAGAAGCAAATGTTGCCTTCTTTCTTTAATGGCAAGGCTGAAAATCGGACACCTGATGTATACTTGGAGATAAGGAATTGGATAATGAAGAAGTTTCATTCAAATCCAAATGTGCAAATTGAATCGAAAGATATGTCACAGCTTAATGTTGGAGATGCGGATGCTAGGAAAGAGGTAATGGAGTTTTTGGACTATTGGGGTTTAATTAACTTCCACCCATTCCCTTCAATGGATTCTGCTGTGGCCACTGCCAGTGATGATGGGGAGGCCGAAAAGAATTCTTTGCTTGAAAAATTGTATCACTTTGAAACTCTCCAATTATGTCCACCTGTTCAAAGGTCTAGCCAAACAACTCCAGCTGCGGCCTCTGGTTTGTTTCCAGAGTCTACAATTGCTGAAGAGTTGGTGAAACAAGAGGGGCCAGCAGTTGAGATGCTTGAGTACCATTGCAACTCATGTTCTGCTGATTGTTCTCGCAAACGTTACCACTGCCAGAAGCAGGCAGATTTTGATCTATGTTCCGACTGCTTTAGTAATAGAAGATTTGGCTCGGGCATGTCTTCATTGGATTTTATACTCATGGAACCAGCTGAAGTTGCAGGGGTTAATGGTGGAAAGTGGACTGATCAAGAGACCCTTCTGCTCCTTGAGGCCTTAGAACTTTATAAAGAAAATTGGAATGAGATTGCAGAACATGTTGGAACAAAAACAAAAGCTCAGTGCATATTGCACTTTGTTCAAATGCCAATTGAGGATACCTTTGTTGAATCTGATGATGATGTTGATACTGGTTGCAAAGAACCTGCAGATCCAGTTGCGACAAACAATGACTCATCTATGGACAAGGATGCTTCAGAGTGTGTTGAGAATGACACTAGCGATGGCATCAAAGACCATGATAAAACTTCCAATGCGGAGAATGTTGAAGTGAAGGTGAATCAGGAAGAAAATCTTAAGTTACAAGAAGGCAGTGATGAGAAAGCTAGTCAGGGAACATCTAAATCAGAAGATGCTGTTAAGGGGAAGTCTGATGAGGAAGCAGGCAATGACTGTGCTATAAATGCTCTTAAGGAAGCATTTGCTGCTGTTGGTTATTCTCCTGGACCTGAAGGCCCTTCTTCATTTGCTGAAGTGGGTAATCCTGTCATGGCACTGGCAACTTTCCTTGCACACTTGGTGGGTACTGATGTGGCTGTTGCGTCAGCTCATAGCTCCATAAAGTCCATGTCAAGAAATTCTCCTGGCATTGAACTTGCTGCAAGGTGTTGCTTTCTTCTAGAAGATCCGATGGATAATAGGAAGGAACCAACTAGTTCTGAGAGGGATTCTAAAAGCGAGGGAGATCAGGATGAAGTAAATGTAAAGAAGGACCAACTGATGTTGGATGATAAAGATTTACCGAATGATTACAATAAAGTGAACATTGGAAGTAACACTTTAGAAGACAAGGGACAGCCGGCTTCTACAGATGATAAAGCCTCAGAAAAACCAATTTCTTCAAAGGAGCAACCAATGGTAAATCATGACAGTGGGCTTGACAATTGCAATGTTCCTGTCAGTGCAAAGCTATCCAATGCTCAAGCACCAGGCACTCTGCATAATTCAGGTGGTTCAAAATCCAAGGATGAAATCCAATCTAATTCTGACAAGGTTCAGGAGGAAACTTTAACCGAAGAACCTTGTCATTTTACGAAGGGCTTATGTGCGTCTGATTCGCTCCCATCAGTGAAGAAAGAACTTAAGTCACTTAAATCCAATTTACCAGGAAAGCATCCAAAGCCAGTAGAGACATCAAAATGTGAGACAGTTTCTGATTCTATTCCCCCAACTAAGAGTAAGTCTCAAAATCCACAAACAACAAATCCAGGTTCTGAATCCGTAGAAACAACAGACTCAGCCATGGATGTTGATGGAGTTTCTAATTCCTTGCCATCAGAAAAGATTGACTCGCAGGAACTATTAACATCAAAATCATCCCAATGTAATGGAACAGAAAACGATATAGATATGATGTCACCATCAAATCCAGTTAGACCAAATTCTGGTGCTGAAAATGATGCAAGTACAGGTAATGATCATGCAGATAATGGAGCAAAAATGGAGGATAATGAGACGAAGACTAAACAGGATAGCAATTTTGAGAAAATGAAACGTGCTGCAGTCTCTACACTTGCTGCAGCAGCAGTAAAAGCAAAACTTTTAGCAAATCAGGAAGAAGACCAAATCCGACAGCTTACGTCCTTGTTGATAGAAAAACAGTTGCAGAAGTTGGAAACTAAGTTGGCCTTTTTCAATGATGTGGAGAATGTGGTGATGAGAGCAAGGGAGCATGTAGAGCGATCACGGCATAAGCTTTATCACGAGCGTGCTTTGATTATTGCATCACGGCTTGGTTTACCAGCTTCCTCCTCTAGAGGTGTACCACCAACTCTACCAACCAATAGGATTCCTACAAATATTCCAAATTCACTTCCAAGACCACAAATGATGATGATGAGTCCACAAAGGCCATTTATTTCTAGACCTGCAGGCACTGTAGCTACTACTCTTCAAAACCCATTAGCATCTTCGACTGCAACAGGGAATTCAGTTCGACCTCCTAACCAGGAAAAACTTTCTTCTGTTGGGACAAAATAA 3108 0.4501 MEEKRRDAPSSAADSPASEPASRRRAGTNKRKSAALSASGSSSAPSKRAPRDKPSPFHPPPLHNGPLTRARQTPNSLAAASSSAAASAPPAVKHSERTHPSAADSAALAEQLRKESEWETLEAAIEAEFEAIRSRGANAHVVPTHCGWFSWLYIHEIEKQMLPSFFNGKAENRTPDVYLEIRNWIMKKFHSNPNVQIESKDMSQLNVGDADARKEVMEFLDYWGLINFHPFPSMDSAVATASDDGEAEKNSLLEKLYHFETLQLCPPVQRSSQTTPAAASGLFPESTIAEELVKQEGPAVEMLEYHCNSCSADCSRKRYHCQKQADFDLCSDCFSNRRFGSGMSSLDFILMEPAEVAGVNGGKWTDQETLLLLEALELYKENWNEIAEHVGTKTKAQCILHFVQMPIEDTFVESDDDVDTGCKEPADPVATNNDSSMDKDASECVENDTSDGIKDHDKTSNAENVEVKVNQEENLKLQEGSDEKASQGTSKSEDAVKGKSDEEAGNDCAINALKEAFAAVGYSPGPEGPSSFAEVGNPVMALATFLAHLVGTDVAVASAHSSIKSMSRNSPGIELAARCCFLLEDPMDNRKEPTSSERDSKSEGDQDEVNVKKDQLMLDDKDLPNDYNKVNIGSNTLEDKGQPASTDDKASEKPISSKEQPMVNHDSGLDNCNVPVSAKLSNAQAPGTLHNSGGSKSKDEIQSNSDKVQEETLTEEPCHFTKGLCASDSLPSVKKELKSLKSNLPGKHPKPVETSKCETVSDSIPPTKSKSQNPQTTNPGSESVETTDSAMDVDGVSNSLPSEKIDSQELLTSKSSQCNGTENDIDMMSPSNPVRPNSGAENDASTGNDHADNGAKMEDNETKTKQDSNFEKMKRAAVSTLAAAAVKAKLLANQEEDQIRQLTSLLIEKQLQKLETKLAFFNDVENVVMRAREHVERSRHKLYHERALIIASRLGLPASSSRGVPPTLPTNRIPTNIPNSLPRPQMMMMSPQRPFISRPAGTVATTLQNPLASSTATGNSVRPPNQEKLSSVGTK 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02509 1035 ProSiteProfiles Myb-like domain profile. 356 406 IPR001005 -
Spst2g02509 1035 Gene3D - 359 410 - -
Spst2g02509 1035 SMART zz_5 301 345 IPR000433 GO:0008270
Spst2g02509 1035 SUPERFAMILY Homeodomain-like 359 412 IPR009057 -
Spst2g02509 1035 ProSitePatterns Zinc finger ZZ-type signature. 307 333 IPR000433 GO:0008270
Spst2g02509 1035 Gene3D - 146 231 IPR036388 -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 997 1035 - -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 657 699 - -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 586 626 - -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 959 984 - -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 756 849 - -
Spst2g02509 1035 Coils Coil 892 912 - -
Spst2g02509 1035 ProSiteProfiles Zinc finger ZZ-type profile. 302 356 IPR000433 GO:0008270
Spst2g02509 1035 SUPERFAMILY Homeodomain-like 137 234 IPR009057 -
Spst2g02509 1035 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 359 398 IPR017930 -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 963 984 - -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 586 869 - -
Spst2g02509 1035 PANTHER SWI/SNF COMPLEX-RELATED 694 952 - -
Spst2g02509 1035 SMART sant 360 408 IPR001005 -
Spst2g02509 1035 Pfam SWIRM domain 143 228 IPR007526 GO:0005515
Spst2g02509 1035 CDD ZZ_RSC8 305 349 IPR041984 -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 68 83 - -
Spst2g02509 1035 ProSiteProfiles SANT domain profile. 363 410 IPR017884 -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 1 110 - -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 414 503 - -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 439 503 - -
Spst2g02509 1035 CDD SANT 380 405 IPR001005 -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 700 717 - -
Spst2g02509 1035 FunFam SWI/SNF complex subunit SMARCC2 isoform C 360 410 - -
Spst2g02509 1035 SUPERFAMILY RING/U-box 297 350 - -
Spst2g02509 1035 Gene3D - 299 348 IPR043145 -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 852 869 - -
Spst2g02509 1035 Pfam Myb-like DNA-binding domain 362 404 IPR001005 -
Spst2g02509 1035 ProSiteProfiles SWIRM domain profile. 140 237 IPR007526 GO:0005515
Spst2g02509 1035 MobiDBLite consensus disorder prediction 32 48 - -
Spst2g02509 1035 MobiDBLite consensus disorder prediction 999 1035 - -
Spst2g02509 1035 Pfam Zinc finger, ZZ type 304 339 IPR000433 GO:0008270
Spst2g02509 1035 Pfam SWIRM-associated region 1 880 956 IPR032451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02509 Spst-Chr2 24710391 24715807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02509 305 402 EF-hand Containing Proteins AT3G07740 37.069 2.18e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02509 K11649 - gmx:100799723 1607.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02509 2 24710391 24715807 Spst2g02509 2 24710391 24715807 ECH