Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02501 ATGACTGAGGGAAAGGTAGTTGAAGCTCACAAAACACTTGGGGATTTCGATCCTCCCAAGAAGCCCAAAAGAAACAAGTATGCTTTTGGTTGCGCCATGTTGGCCTCCATGACATCCATTTTACTTGGCTACGATATCGGGGTGATGAGTGGTGCAGCCCTGTACATAAAGAAGGACCTAGGTGTGTCGGACGTGCAAATCGAGATACTGATGGGAATCATCAACCTGTACTCTCTGATAGGGTCGTGCCTGGCCGGCAGAACCTCCGACTGGATAGGGCGGCGATACACCATTGTATTCGCCGGCGTCATCTTCTTCGTCGGAGCACTTCTCATGGGATTCTCCCCCAACTATTCCTTTCTCATGTTCGGGCGTTTCGTGGCGGGCATCGGCATCGGCTACGCCCTCATGATCGCCCCTGTCTACACCGCCGAGGTCTCCCCGGCCTCCTCTCGTGGCTTCCTCACGTCCTTCCCGGAGGTTTTTATCAATGGAGGGATATTACTGGGATACATATCTAACTACGCATTTTCGAAGATGACATTGAAGTTGGGATGGCGAATGATGCTTGGAGTGGGTGCAATTCCTTCGGTAATCCTAACAGTGGGGGTGTTGGCGATGCCGGAATCTCCACGGTGGCTGGTGATGAGGGGGCGTTTGGGAGAGGCGACAAAAGTGCTGAACAAAACCTCGGACACGAAGGAAGAAGCTCAACTGAGGCTAGCCGACATCAAAGAAGCCGCAGGGATCCCGGAGAGTTGCAACGAGGACGTCGTTGAGGTAGCGAAACAAAGCACGGGTGAGGGCGTATGGAAAGAGCTCTTCCTCTATCCAACGCCCGCGATTCGTCACATCTTAATTGCAGCCCTCGGGATTCACTTCTTCCAACAAGCCTCGGGCGTGGACGCCGTCGTTTTATACAGCCCCAGAATCTTCGAGAAGGCTGGGATCACCGACGACACGCACAAGCTTCTCGCAACGGTGGCCGTTGGATTCGTGAAGACCATGTTCATCTTGGTGGCGACTTTTATGCTGGACCGCGTGGGTCGTCGTCCATTGTTATTGTCTAGTGTTGGGGGCATGGTGTTGTCGCTGCTCACGCTCGCAATCAGCCTCACCGTCATCGATCACTCGGAGAGGAAACTAATGTGGGCCATTGGATTGAGCATATCCATGGTGTTAGCCTACGTGGCGACGTTTTCCATCGGTGCGGGACCCATCACGTGGGTGTACAGCTCCGAGATCTTTCCTTTGAGGTTGCGGGCGCAGGGTGCGGCTGCGGGTGTTGTGGTGAATAGAACCACAAGTGGGGTTATTTCAATGACCTTTTTGTCCCTCACCAAGGCCATCACTATCGGTGGAGCTTTCTTCCTCTATTTTGGCATTGCCACCGTGGGCTGGTTATTCTTTTACCTCGTGCTTCCTGAGACACGGGGTAGAACACTTGAAGACATGGAAGGGTCTTTTGGTACTTTCAGAGCCAAATCCAACACCTACAAGGGAGAAAATGGAAATGCCCCACCCCACCACCACCAACAACAACAGCTCCAGTTGGGGACCAATCTCCAAACTTAA 1575 0.5295 MTEGKVVEAHKTLGDFDPPKKPKRNKYAFGCAMLASMTSILLGYDIGVMSGAALYIKKDLGVSDVQIEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGVIFFVGALLMGFSPNYSFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKMTLKLGWRMMLGVGAIPSVILTVGVLAMPESPRWLVMRGRLGEATKVLNKTSDTKEEAQLRLADIKEAAGIPESCNEDVVEVAKQSTGEGVWKELFLYPTPAIRHILIAALGIHFFQQASGVDAVVLYSPRIFEKAGITDDTHKLLATVAVGFVKTMFILVATFMLDRVGRRPLLLSSVGGMVLSLLTLAISLTVIDHSERKLMWAIGLSISMVLAYVATFSIGAGPITWVYSSEIFPLRLRAQGAAAGVVVNRTTSGVISMTFLSLTKAITIGGAFFLYFGIATVGWLFFYLVLPETRGRTLEDMEGSFGTFRAKSNTYKGENGNAPPHHHQQQQLQLGTNLQT 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02501 524 FunFam probable polyol transporter 4 21 492 - -
Spst2g02501 524 SUPERFAMILY MFS general substrate transporter 17 486 IPR036259 -
Spst2g02501 524 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 26 489 IPR045262 GO:0015144
Spst2g02501 524 PRINTS Sugar transporter signature 122 141 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02501 524 PRINTS Sugar transporter signature 413 425 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02501 524 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02501 524 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02501 524 PRINTS Sugar transporter signature 390 411 IPR003663 GO:0016020|GO:0022857|GO:0055085
Spst2g02501 524 ProSitePatterns Sugar transport proteins signature 1. 85 102 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst2g02501 524 Coils Coil 227 247 - -
Spst2g02501 524 MobiDBLite consensus disorder prediction 500 524 - -
Spst2g02501 524 Pfam Sugar (and other) transporter 32 487 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst2g02501 524 Gene3D MFS general substrate transporter like domains 21 491 IPR036259 -
Spst2g02501 524 ProSitePatterns Sugar transport proteins signature 2. 127 152 IPR005829 GO:0016020|GO:0022857|GO:0055085
Spst2g02501 524 CDD MFS_PLT 34 485 IPR044776 GO:0005351
Spst2g02501 524 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 478 IPR020846 GO:0022857
Spst2g02501 524 NCBIfam sugar porter family MFS transporter 24 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02501 Spst-Chr2 24622659 24624721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02501 18 523 Organic Solute Cotransporters AT3G18830 70.414 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02501 - - gmx:100800461 896.345