Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02492 ATGATACTTGATATCCGTCAAGGTAAAGATATGATATCCTCAACTTTCTCCCAGGTTCATTCATTTTGTGCCAAAGTTGTCAAAGATCATTCTCTTATTGAGTCATCAACTACAAGGAGAAAACAGCTGGCAGAGTCCAGCTGTTTTTGTCTTCGTTACCCCAAGAAAACCAGTTACCAGATCAATTCTTTTATGAAGGATATGGCTGTTCTTGCACCAGCAAGTTCATGTTTTGGAGCAAAGTATCAGGCTCTAGCACCATTGAGAATTTTAAGGGGTCTGGTGTGTCTACTGGTGCTGCTTTCAACAGCATTTATAATGTTAGTGTTCTTTGGCTTTATAAGTGCTGTTATAGTTCGACTTTTTAGTATCAGTTACAGCAGGAGAGCGACTTCCGTTTTCTTTGGTGCCTGGCTTGCTTTGTGGCCCTTTCTATTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGATAGTGTTCCTTCGAGAGAACGGATCTTACTGATCGCAAATCATAGAACTGAGGTTGATTGGATGTATTTGTGGGACCTTGCCTTGAGGAAGGAATGCCTTGGATACATAAAATATATTCTTAAGAGCAGCTTGATGAGACTTCCTGTTTTTGGTTGGTCATTTCACATACTAGAGTTCATCCCAGTGGAAAGAAAGTGGGAGGCTGATGAGTCAATCATGCGCCATATGCTTTCCACATTCAAGGATCCCCAAGATCCTCTGTGGCTTGCTCTCTTCCCAGAAGGAACTGATTTTACTGACCAAAAGTGCCTTCGGAGTCAAAAATATGCTGCTGAACATGGGTTACCAGTTCTGAAAAATGTTTTACTTCCAAAGACAAAGGGCTTCTGCGCCTGCTTGCAAGAGTTGAGGGAATCTCTCACTGCAGTTTATGACGTGACCATTGGCTACAAAGACCGCTGTCCATCTTTCTTAGACAATGTCTTTGGGGTGGATCCTTCTGAAGTTCATATTCATATCCGCCGTATCCCCCTCGGTTCTGTCCCGGTCTCTGAAGAAGAAATGTCCACTTGGTTGGTAAATAGATTCCAGCTGAAAGATCGGTTACTTTCCAATTTTCAAATTCAAGGTCAGTTTCCGGATCCAGCAACAGAAAGGGACCTCTCTAGTGTGAAGAGCATTTTAAATTGTATGACAATTGTTACTGTTACAGGTACATGCATGTACTACAGTTTTTCCTCTCTCTGGTTTAAACTTTATGTGTCTCTAGTCTGTGCTTATTTGGTTCCAGCTACATATTTCAATATTCGGCCACAGCCCATTCTTAGCATTTTGAAGATGAGATCAACATGCCACCTCTGA 1338 0.4155 MILDIRQGKDMISSTFSQVHSFCAKVVKDHSLIESSTTRRKQLAESSCFCLRYPKKTSYQINSFMKDMAVLAPASSCFGAKYQALAPLRILRGLVCLLVLLSTAFIMLVFFGFISAVIVRLFSISYSRRATSVFFGAWLALWPFLFEKINKTKVVFSGDSVPSRERILLIANHRTEVDWMYLWDLALRKECLGYIKYILKSSLMRLPVFGWSFHILEFIPVERKWEADESIMRHMLSTFKDPQDPLWLALFPEGTDFTDQKCLRSQKYAAEHGLPVLKNVLLPKTKGFCACLQELRESLTAVYDVTIGYKDRCPSFLDNVFGVDPSEVHIHIRRIPLGSVPVSEEEMSTWLVNRFQLKDRLLSNFQIQGQFPDPATERDLSSVKSILNCMTIVTVTGTCMYYSFSSLWFKLYVSLVCAYLVPATYFNIRPQPILSILKMRSTCHL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02492 445 Pfam Acyltransferase C-terminus 321 390 IPR032098 -
Spst2g02492 445 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 100 314 - -
Spst2g02492 445 Pfam Acyltransferase 156 310 IPR002123 GO:0016746
Spst2g02492 445 CDD LPLAT_LCLAT1-like 143 333 - -
Spst2g02492 445 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 85 423 - -
Spst2g02492 445 SMART plsc_2 167 281 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02492 Spst-Chr2 24512637 24514645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02492 81 432 Miscellaneous Gene Families AT1G75020 61.190 1.22e-161 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02492 K13513 - gmx:100814885 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02492 2 24512637 24514645 Spst2g02492 2 24512637 24514645 ECH
Spst2g02492 2 24512637 24514645 Spst3g04027 3 90983514 90989307 ECH