Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02488 ATGCCTATGGAGGCTTTCTTAGTATCAACCACCATTCCTTCCTCTTTCTCACCACCTACTCACAGCAAACTTTCTGCTTCATATCTTAATCTTTCCCATTTCACATGGTACCCCTGCACCTCAAGAGCCACAAACCACAGAATCCGTTGCACCAAAGCTCAAGCTGCAGGTTCAACAAAATCTATTACGTTTACTGCTGAGGGGAGTTCTGAGAAAACAGAGTCCAAGGATGACAACTTAGTATTTGTTGCGGCTGCTACTGGTAGAGTTGGTTCACGGACAGTGAGGGAGCTTATTAAGCTTGGCTTTCGAGTCAGAGCTGGAGTGCAAAATGCTGAGAGGGCTGGTTCATTAGTTCAGAGTGTTGAACAATTGAAGCTTGATGGTGCAAGAGAGGGACAAGCTGTAGAGAGGCTTGAAATTGTGGAATGTGATTTGGAGAAACCAGATACAATAGCATCGGCATTAGGGAATGCATCAACAGTGATTAGTAGCGTTGGTGCCAGTGAGAGGGGAATTCTTGACATCACTGCACCCTTTCAATTTCCGAAAGACTATCAGGCCACCAAAAATCTAATTGACGCTGCAACTGTTGCCAAAGTGAATCACTTCATATTGGTTACTTCACTTGGAACAAACAAAATTGGTTTTCCTGCAGCTATCCTCTATTTGTTTTGGGGATTCCTGATTTGGAAAAGAAAGGAAGAAGAAGCATTGCTAGCCAGTGGACTACCATACACAATAGTCAGAACTGCATGTATGGAGCAGCCTACTGATGCTTTCAAAGAAACTCATAACATAACCCTATCAACGGAAGATACTTTATTTGGGGGACAGGTGTCAAACCTTCAGATCGCTGAACTCATGGCAGTCATGGCCAAGAATCGTGATCTTTCTTACTGTAAAATAGTGGAGGTAGTTGCAGTGACAACTGCACCGCTGACTCCGGCGGAGGAACTTCTTGCAAAGATACCCTCTCAACGGCCTTACATTTCTTCAGCCAAGGAACCAACTACTGCTGCTGTCAGTGTTCCAGAACCCTCTGCAAATGTAGTGTCTGAGGAACCTAGCATTGCCACTCAGAAAAAAACTGCGCAACCGAAACCAGTGGCAAATCAGCCACTTTCACCCTACACTGTTTATGATGATTTGAAGCCACCTTCATCTCCTTCTCCATCTCAGCCTGGTGGCGGAGAAAAAACAAAGATCAGTGAGACAGTGCAAATACCAGGTGCTTCAAATACTCCAAGTAGTGTGCAAGGAGTTGATGGCATCTCTCATACAGCATATTCATCTAAAGTGGAGAAGCCTCTTTCTCCTTATGTAGCATATCCTGACTTAAAGCCTCCCACTTCACCATCTCCAAATGCACCAACTATATCAATTTCCTCATCGGTTGTGGATGGGGTGCCAGAGATAGTCACAGTCTCAAGCAATGGACCAGCCCAACTTTCAATAGGAGATGAACCAAAGGAGGGACATCTCCCTGAACGCAAGCCAAGACCACTTTCACCTTATATAATGTATGAGGACTTGAAGCCTCCTGCATCACCATCACCTTTCTTCAGAAAATCTTAG 1578 0.4468 MPMEAFLVSTTIPSSFSPPTHSKLSASYLNLSHFTWYPCTSRATNHRIRCTKAQAAGSTKSITFTAEGSSEKTESKDDNLVFVAAATGRVGSRTVRELIKLGFRVRAGVQNAERAGSLVQSVEQLKLDGAREGQAVERLEIVECDLEKPDTIASALGNASTVISSVGASERGILDITAPFQFPKDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILYLFWGFLIWKRKEEEALLASGLPYTIVRTACMEQPTDAFKETHNITLSTEDTLFGGQVSNLQIAELMAVMAKNRDLSYCKIVEVVAVTTAPLTPAEELLAKIPSQRPYISSAKEPTTAAVSVPEPSANVVSEEPSIATQKKTAQPKPVANQPLSPYTVYDDLKPPSSPSPSQPGGGEKTKISETVQIPGASNTPSSVQGVDGISHTAYSSKVEKPLSPYVAYPDLKPPTSPSPNAPTISISSSVVDGVPEIVTVSSNGPAQLSIGDEPKEGHLPERKPRPLSPYIMYEDLKPPASPSPFFRKS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02488 525 MobiDBLite consensus disorder prediction 353 373 - -
Spst2g02488 525 Gene3D - 77 327 - -
Spst2g02488 525 MobiDBLite consensus disorder prediction 336 402 - -
Spst2g02488 525 FunFam Protein TIC 62, chloroplastic 77 327 - -
Spst2g02488 525 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 26 465 IPR044719 -
Spst2g02488 525 MobiDBLite consensus disorder prediction 478 525 - -
Spst2g02488 525 Pfam NAD(P)H-binding 86 295 IPR016040 -
Spst2g02488 525 CDD SDR_a5 81 295 - -
Spst2g02488 525 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 79 308 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02488 Spst-Chr2 24453135 24458834 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02488 - - gmx:100779056 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02488 2 24453135 24458834 Spst2g02488 2 24453135 24458834 ECH