Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02478 ATGAACTCCTTGGGAAGAGGTTTCACGGAAGAGCAAGAAGCTCTGGTGGTGAAATCATGGAGCGTAATGAAGAAGAATTCTGGAGAGTTGGGTCTCAAGTTTTTCTTGAAAATATTTGAGATTGCTCCCTCAGCTCAGAAATTGTTCTCATTCTTGAGAGATTCCACCGTTCCTTTGGACCAAAACCCCAAGCTCAAGCCCCATGCCATGTCTGTCTTTGTAATGACCTGTGATTCAGCAGTTCAACTGCGGAAGGCTGGTAAAGTCACTGTCAGAGAATCAAACTTGAAAAAACTAGGTGCTACCCATTTTAGAACTGGTGTTGCAAACGAGCATTTTGAGGTGACAAAGTTTGCACTTTTGGAGACCATAAAAGAAGCTGTACCTGAAATGTGGTCTCCAGAGATGAAGAATGCATGGGGAGAAGCTTATGATCAGCTCGTGGATGCCATTAAATCTGAAATGAAACCACCCTCCTCTTAG 483 0.4348 MNSLGRGFTEEQEALVVKSWSVMKKNSGELGLKFFLKIFEIAPSAQKLFSFLRDSTVPLDQNPKLKPHAMSVFVMTCDSAVQLRKAGKVTVRESNLKKLGATHFRTGVANEHFEVTKFALLETIKEAVPEMWSPEMKNAWGEAYDQLVDAIKSEMKPPSS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02478 160 Pfam Globin 33 151 IPR000971 GO:0020037
Spst2g02478 160 ProSitePatterns Plant hemoglobins signature. 62 73 IPR019824 GO:0019825|GO:0020037
Spst2g02478 160 ProSiteProfiles Globin family profile. 8 156 IPR000971 GO:0020037
Spst2g02478 160 PRINTS Plant globin signature 62 90 - -
Spst2g02478 160 PRINTS Plant globin signature 127 153 - -
Spst2g02478 160 PRINTS Plant globin signature 34 54 - -
Spst2g02478 160 PRINTS Plant globin signature 9 26 - -
Spst2g02478 160 SUPERFAMILY Globin-like 7 156 IPR009050 -
Spst2g02478 160 CDD class1_nsHb-like 8 156 - -
Spst2g02478 160 PANTHER LEGHEMOGLOBIN-RELATED 6 156 IPR001032 GO:0019825|GO:0020037
Spst2g02478 160 Gene3D Globins 7 154 IPR012292 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02478 Spst-Chr2 24397565 24398499 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02478 - - var:108340568 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02478 2 24397565 24398499 Spst2g02478 2 24397565 24398499 ECH