Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02452 ATGATGTCTCCCACACTCTCACTCTCACTCTCACTCTCATTCTCTTGCAATCCCAAACACACAAACTCGTTTTTCTCTTTTCCTTTGCAGGATTTAGCCAACACTTCTACTCTCAGGCTTTCGCCAAAGCTTCCACTTCGTTGCTCTCAGGAAAGTAGCTTTGCATCACCACCAGTTGGGCTTGATGAAAGCATCGGGGGAATATCAACCACAAACGACCGCGTTTTGAGCGGCAACAGTTTGGTGAATCGGCAAAATGGGTTAACTCCACTAGTCAGTGCATTGAAAGCTTCTGCAGAGCAAAATGTTGCCAGTTTTCACTTTCCTGGACATAACAGAGGGCATGCTGCTCCTGCTTCCTTGACTCGGCTCATTGGAACGAGACCCTATGTGCATGATTTACCTGAGCTTCCAGAACTTGACAATCTCTTTTGTCCCCAAGGCCCAATATTAGAAGCGCAGACTGAAGCAGCCAAACTGTTTGGATCGTCACATACATGGTTTCTTGTTGGAGGTACTACTTGTGGGATACAGGCAGCCATTATGGCTACCTGTTCCCCGGGAGAATTTCTGATTCTTCCAAGGAATTCCCATATATCAGCTATATCTGCTATGGTATTGTCTGGTGCTGTGCCTAAGTACATCGTTCCTGACTATGAAAATAATTGGGACATTGCTGGTGGTGTCACTCCATTACAGGTATTGAAAGCCATCCGGGAATTAGAAATGGAAGGGAAAAAGGCTGCAGCAGTCTTCATCACTTCGCCTACTTATCATGGTATTTGCAGTAACTTAAGTGAGATTTCCGAGCTGTGTCATTCTCGAAAAATTCCTTTGATTGTTGATGAAGCTCATGGCGCACATTTTGGATTTCATTCTGAACTGCCAAAGTCAGCCCTCCAGCAAGGGGCTGATTTGACTGTACAGTCCACTCACAAAGTTCTCTGCTCTCTTACTCAGTCATCTATGCTGCACATGTCGCGAAATATTGTAGATAAGGAAAATATTGATAGATGTCTCCAAACTCTTCAAACCACAAGCCCTAGCTATCTGCTTTTGGCATCCCTGGATGCTGCCAGAGCTCAACTTAGTGAAAGACCTGATGTTATATTCAACCAAGCAATTGCATTAGCTTATGAAGCAAGGTATACGCTAAAACCAATCCCCGGTATATCAGTGCTTGAGAATTCAAGCTTTTCAACCTTCCCTGCAATTGATCCATTGCGTCTCACTGTAGGCTTTTGGAAGCTTGGTTTATCGGGTTATGAAGCAGACGAAATTTTATACAGAGATTATGGTGTTGTCTGTGAACTTGTTGGGAATAAATCTATTACTTATGCATTTAATATTGGGACTTGTAGGGACCATGTCCAAAGACTTCTATTGGGAATAAAACATTTGACTGCAACATATGCTTCCATTCAGCACCGTGTAGAGAAAGTGCATAATGTTCATGCACCCTTTGATGATATAATCATGAATTTGATCCCTAGAGATGCCTTTTTTGCTAGCAAAAGAAAAGTAACAATAAGGGAGAGCATCGGTGAGATTTCAGGGGAGCTTATATGTCCATACCCTCCGGGCATACCAGTATTGATCCCCGGTGAGGTTATCACCGAAAAAGCTGTTGATTATCTTCTATATGTTAGGAGTAAAGGTGCTGATATTAGCGGGGCATCTGATCCCTTACTTTCTTCAATAGTTGTCTGCAACTTATAG 1719 0.4305 MMSPTLSLSLSLSFSCNPKHTNSFFSFPLQDLANTSTLRLSPKLPLRCSQESSFASPPVGLDESIGGISTTNDRVLSGNSLVNRQNGLTPLVSALKASAEQNVASFHFPGHNRGHAAPASLTRLIGTRPYVHDLPELPELDNLFCPQGPILEAQTEAAKLFGSSHTWFLVGGTTCGIQAAIMATCSPGEFLILPRNSHISAISAMVLSGAVPKYIVPDYENNWDIAGGVTPLQVLKAIRELEMEGKKAAAVFITSPTYHGICSNLSEISELCHSRKIPLIVDEAHGAHFGFHSELPKSALQQGADLTVQSTHKVLCSLTQSSMLHMSRNIVDKENIDRCLQTLQTTSPSYLLLASLDAARAQLSERPDVIFNQAIALAYEARYTLKPIPGISVLENSSFSTFPAIDPLRLTVGFWKLGLSGYEADEILYRDYGVVCELVGNKSITYAFNIGTCRDHVQRLLLGIKHLTATYASIQHRVEKVHNVHAPFDDIIMNLIPRDAFFASKRKVTIRESIGEISGELICPYPPGIPVLIPGEVITEKAVDYLLYVRSKGADISGASDPLLSSIVVCNL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02452 572 CDD Orn_deC_like 90 385 IPR000310 GO:0003824
Spst2g02452 572 SUPERFAMILY Ornithine decarboxylase C-terminal domain 427 570 IPR036633 GO:0003824
Spst2g02452 572 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 506 552 IPR008286 GO:0003824
Spst2g02452 572 Gene3D - 471 567 - -
Spst2g02452 572 PANTHER ARGININE DECARBOXYLASE 83 571 - -
Spst2g02452 572 Pfam Orn/Lys/Arg decarboxylase, major domain 89 386 IPR000310 GO:0003824
Spst2g02452 572 SUPERFAMILY PLP-dependent transferases 89 465 IPR015424 -
Spst2g02452 572 Gene3D - 89 368 IPR015421 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02452 - - vum:124823144 947.192