Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02435 ATGGCGAAGGACGATCCGTTCGCACATTTGAACCCTAAGACGTGCGTGGTTTTAGGTGGCAGAGGATTCCTCGGAAAATCGTTAGTCCTCAGGCTGTTGAAACTCGATAACTGGATCGTTCGAATCGCCGATTCCGCTCAGTCTCCCCAACTCCTTTACACCGAGTCTTTCCTCGCGCAAGCTCTCTCTTCCGCCCGCGCTTCTTACTTTCACGTCGACCTTACCGATATGCGCAGCATTGTCAAAGGTCCACAATCCTTTCTGTTACGTCACGTGTTCATCCTGTGCATCACACTCGAATCTGCCTCATTTTCTTCCAATTTCTTTCAATTACGGAAACTGATAGCACCGTTGAATGCGTTTTGTGCAGTTCTAGAAGGTTCTTCTGTTGTGTTTTATATGGATATTGCTGGCGTCGATGTCAATGACTTTTATACTTCTTATATGCTAATAGTTCAAGGTGCAAAGAATGTCATTAGTGCGTGCCGAGAATGTAGAGTGAAACGCCTAATATATAACAGTTCCGCGGATGTTGTATTTGATGGTTTGCATGATATTCGTGATGGAGATGAGTCGTTGGCCTATCCGTGGAAAACTGAAGACATGTTAAGTGACCTTAAGGCTCAAGCGGAAGCTTTGATCCTGAGTGTCAATGACATTGATGGCCTATTGACATGTTCTCTTCGTCCTAGTAATGTTTTTGGACCTGGGGACACAGAATCTGTACCATACTTTCTCAAGTTAGCAAGATATGGTTTTGCAAAGTTTATTATAGGGACTGGTGATAATCTTTCAGACTTCACCTTTTCTGAAAATGTTACTCATGCCCATATCTGTGCAGAAGAAGCCTTAAATTTCCAAACAGTTTCTGTGGCAGGAAAGGCATTTTTCATCACAAATGATGAGCCTATACATTTCTGGGAATTTCTCTCACTTTTGTTAGAAGGTCTGGGATATGAAAGCTCTTCCGTTGGTATATTTGCTCTGTTGAAAATTCCTTGCTTGAGTTGCAGGCCGTACATCAAACTTCCTGCTAAGTTGGCTCAATATATTCTATCAGTTTTAAAGTGGTCGCATGAAAAGTTGGGACCCAGATACTTCAGTTATCCTTTATTACTTCATTTTTTTCATTTAGCTTTGTACACCCAAACTTTCAACTGCATGGCAGCTCACAAACATATTGGATATTCACCAATAGTCTCCCTTGAGGAAGGAATCACATTAACCATTGAATCGTTCTCTCATTTATCCAAAGACTCGTGTTTATCAAGATCCTGCAGTTCCACTGTACGGTCAAAAGCGGATAAGCTGCTGGGTGGAGGGAAAGTGGCTGGCATTTTGTTGTGGAGAGACGAGAAGAAATCATTTACATGTTTCATTGTGCTGGTTTTGTTGTTTTACTGGTTTTTCCTTTCTGGAAGAACTTTTATATCATCTGCTGCAAAACTTTTGCTGCTTGCCAAGTTACTTTTTTATGGACACGGTTTTCTGCCATCAAAGTTTTTTGGTTTCAATATACAAAGGATACCCGTGTCTTATTTCGAGATCTCTGATGCGGTAGTGAAAGATTCAGTTACAACTATAGTATATCTTTGGAACAAGGGTTTTCAAATAATAAGAAGGTTGGCCCATGGGGACGATTGGTCTGCATTCTTCAAGATTGCAGTTTTTCTTTACCTTCTGAAGATGGTCCTGTCAAAGTTGCTGACAAAATTGATAGGCATAGGTTTGGTCTTCGCATTTATGGCATTTTTTGTTTACGAGCAATTTGAATCAGAAATTGATGGAGTGGTGGATACTCTTTTCAGAAGTGTGAAAGAGCTCATGATACATTTGATGAGAATTTCACCTGTTTTTATATCGAGGCTTCTGCATTATCATGACAACTTGCAGCAGTACGAAGGACCAAGAAAGATAAAAGACATGAGATAG 1932 0.4073 MAKDDPFAHLNPKTCVVLGGRGFLGKSLVLRLLKLDNWIVRIADSAQSPQLLYTESFLAQALSSARASYFHVDLTDMRSIVKGPQSFLLRHVFILCITLESASFSSNFFQLRKLIAPLNAFCAVLEGSSVVFYMDIAGVDVNDFYTSYMLIVQGAKNVISACRECRVKRLIYNSSADVVFDGLHDIRDGDESLAYPWKTEDMLSDLKAQAEALILSVNDIDGLLTCSLRPSNVFGPGDTESVPYFLKLARYGFAKFIIGTGDNLSDFTFSENVTHAHICAEEALNFQTVSVAGKAFFITNDEPIHFWEFLSLLLEGLGYESSSVGIFALLKIPCLSCRPYIKLPAKLAQYILSVLKWSHEKLGPRYFSYPLLLHFFHLALYTQTFNCMAAHKHIGYSPIVSLEEGITLTIESFSHLSKDSCLSRSCSSTVRSKADKLLGGGKVAGILLWRDEKKSFTCFIVLVLLFYWFFLSGRTFISSAAKLLLLAKLLFYGHGFLPSKFFGFNIQRIPVSYFEISDAVVKDSVTTIVYLWNKGFQIIRRLAHGDDWSAFFKIAVFLYLLKMVLSKLLTKLIGIGLVFAFMAFFVYEQFESEIDGVVDTLFRSVKELMIHLMRISPVFISRLLHYHDNLQQYEGPRKIKDMR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02435 643 ProSiteProfiles Reticulon domain profile. 443 640 IPR003388 -
Spst2g02435 643 Pfam Reticulon 443 599 IPR003388 -
Spst2g02435 643 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 413 IPR036291 -
Spst2g02435 643 Gene3D - 6 98 - -
Spst2g02435 643 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 121 324 IPR002225 GO:0003854|GO:0006694|GO:0016616
Spst2g02435 643 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 16 82 IPR002225 GO:0003854|GO:0006694|GO:0016616
Spst2g02435 643 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 13 413 - -
Spst2g02435 643 Gene3D - 115 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02435 Spst-Chr2 23996153 24000818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02435 125 420 Lipid Metabolism Gene Families AT2G33630 27.848 4.91e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02435 K23558 - gmx:100794808 898.656