Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02428 ATGGGGAAGCCTTTATTTTATGAGATCTTGGAAAAACCTGCCACAAGTTGTATCATAGGAATATGCTGCATGATTTGGTTCTATATACAGAAGAAAAATATTGGGTATTCACATGTGGGTCTGAGTTATGAGACTGCAGTAGAAGGGCATTATTGGAGGATAATTACTTCTGCTCTTTCTCATATTAGTGTTATTCATCTTGTTTTTAATATGAGTGCATTATGGAGTCTTGGGGTGGTAGAGCAGCTTGGGCACTTAGGCCTTGGTGTTGAGTACTACTTGCAATACACACTTGTGTTGGTTATTGTATCAGGAGTGCTGGTTCTGGCAATGTATCATTTGTTGATTCAGAGATTCAAGCTTGAATATTTTCGTCGAGTGACGGCTGTCGGGTATTCCTGTGTTGTTTTTGGGTGGATGACAATTCTGTCTGTGAAGCAACCATCTTCCAAGTTGGATCTCTTTGGGTTTCTTTCTCTCCCTATCAGTTTTGCGCCGTTTGAATCGCTTATTTTCACTTCCATCATTGTTCCTCAGGCAAGTTTTCTTGGCCATTTGTCAGGGATTGTTGTTGGGTATGCTATAGCATGGGGTTTGATTCATGGGATGAGCAATTACTGGGCACTCTCCTTATTGGGATGGATTGTGCTTGTCTTTGTTTTTAGTTTGAAGAGATCTGGTGCGCTTGATCTAAGCTTTCTTGAGATTGAATCTGTTACCGATCCTTCCCTACCGTCTGTGCGGTTTTTGGCATCAAGCACTGGAAGAACACTGCAGATGAGTGCTTTGCCAAATGGAAATGTTGAAATTGTCTAA 816 0.4118 MGKPLFYEILEKPATSCIIGICCMIWFYIQKKNIGYSHVGLSYETAVEGHYWRIITSALSHISVIHLVFNMSALWSLGVVEQLGHLGLGVEYYLQYTLVLVIVSGVLVLAMYHLLIQRFKLEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLDLFGFLSLPISFAPFESLIFTSIIVPQASFLGHLSGIVVGYAIAWGLIHGMSNYWALSLLGWIVLVFVFSLKRSGALDLSFLEIESVTDPSLPSVRFLASSTGRTLQMSALPNGNVEIV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02428 271 Gene3D - 10 200 IPR035952 -
Spst2g02428 271 FunFam RHOMBOID-like protein 13 9 201 - -
Spst2g02428 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016020
Spst2g02428 271 PANTHER RHOMBOID PROTEASE 13 211 - -
Spst2g02428 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02428 Spst-Chr2 23948513 23949328 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02428 - - gmx:100818954 517.694