Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02404 ATGGCATACAAAGAAGACGTACTTCTACCTCTGATTGCTTTACTTTCCTCATTGATTACTGTCACAGAAAGCATTGCCCTCACTCCAGAAATAGCTTTGTTGAATCGGAACAGTTTCCCAACTGGCTTCATCTTTGGGACAGCATCCTCAGCGTACCAGTATGAAGGTGCAGCAAATGAAGGTGGTAGAGGACCAAGTGTTTGGGATACCTTCACCCATAAATATCCAGATAGGATTGAGGACAGAAGCAATGGAGATGTTGCAGTAGATTCGTACCATCGCTACAAGGAAGATGTTGGGATTATGAAGGATATGAATTTGGATGCCTACAGATTTTCCATATCTTGGTCTAGATTACTTCCGAATGGAAGGCTAAGTGGAGGCATAAATCAAGAAGGAATTGACTATTACAACAACCTTATCAACGAGCTTGTGGCAAATGGATTACAACCATTTGTAACACTTTTCCATTGGGATCTTCCTCAATCTTTGGAAGATGAATATGGTGGCTTTTTAAGTCCTCGCATCGTGAAAGATTTCCAGGATTATGCAGAGCTTTGCTTCAAGGAGTATGGAGATAGAGTAAAAAATTGGATAACTTTGAATGAGCCATGGAGTTTCAGCCACAATGGTTATGCAACAGGGAAAATGGCACCAGGTCGATGTTCTTCTTGGTCGAATCCTAGTTGCAACGGTGGTGATTCTGGGACAGAACCCTATTTGGCCACGCATCACCAACTTCTTGCTCATGCAGCAGCTGTTAATGTGTACAAGACTAAGTATCAGAGATTTCAGAATGGTGTGATAGGCATAACATTGTATTCTGTTTGGTATGAGCCACTATCGGAAAGCAAACTTGACCGACAAGCTGCTGAACGAGCTATTGACTTCACATTTGGATGGTTTATGGATCCATTGACAAGAGGAGAATATCCAAAAAGCATGCGTTCCTTGGTGAAATCACGATTGCCAAAGTTCACAAAAGAGCAATCCAGATTACTTATTAATTCATTTGATTTTCTTGGCATAAACTACTACACTGCTAATTATGTCTCTGATGCACCTGAATTAAGAAATGTCAGAAGTTACCTAACAGATGCCCTTGCAAATTATTCTTTTGTGCGTGATGGTAAACCTATTGGTCTAAATATTGCTTCAGATTGGTTGTATGTTTATCCAAAAGGGTTTCGTGACATTTTGTTATACACTAAAGAGAAATACAACAATCCTCTGATTTATATTACTGAAAATGGTATAAATGAGTATGATGATCCATCACTATCACTTGAAGAATCTCTCTTGGATACTTACAGAATTGACTATTATTATCGTCATTTGTATTATCTTCGAGAAGCAATGAAGAATGGTGTAAATGTAAAAGGGTACTTTGCGTGGTCTCTCTTAGACAACTTTGAATGGAGCTCAGGCTACATCATGCGATTTGGAATAAACTTTGTGGATTACAGAAATGGCTTAAAAAGATACCCAAAACTTTCAGCTTTATGGTTCAAGGATTTTCTCAAAATAGAAAACAAACTTCATGATTCCATGTAG 1554 0.3874 MAYKEDVLLPLIALLSSLITVTESIALTPEIALLNRNSFPTGFIFGTASSAYQYEGAANEGGRGPSVWDTFTHKYPDRIEDRSNGDVAVDSYHRYKEDVGIMKDMNLDAYRFSISWSRLLPNGRLSGGINQEGIDYYNNLINELVANGLQPFVTLFHWDLPQSLEDEYGGFLSPRIVKDFQDYAELCFKEYGDRVKNWITLNEPWSFSHNGYATGKMAPGRCSSWSNPSCNGGDSGTEPYLATHHQLLAHAAAVNVYKTKYQRFQNGVIGITLYSVWYEPLSESKLDRQAAERAIDFTFGWFMDPLTRGEYPKSMRSLVKSRLPKFTKEQSRLLINSFDFLGINYYTANYVSDAPELRNVRSYLTDALANYSFVRDGKPIGLNIASDWLYVYPKGFRDILLYTKEKYNNPLIYITENGINEYDDPSLSLEESLLDTYRIDYYYRHLYYLREAMKNGVNVKGYFAWSLLDNFEWSSGYIMRFGINFVDYRNGLKRYPKLSALWFKDFLKIENKLHDSM 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02404 517 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 43 57 IPR033132 -
Spst2g02404 517 Gene3D Glycosidases 20 509 - -
Spst2g02404 517 ProSitePatterns Glycosyl hydrolases family 1 active site. 412 420 IPR018120 -
Spst2g02404 517 PRINTS Glycosyl hydrolase family 1 signature 337 351 IPR001360 GO:0004553|GO:0005975
Spst2g02404 517 PRINTS Glycosyl hydrolase family 1 signature 480 492 IPR001360 GO:0004553|GO:0005975
Spst2g02404 517 PRINTS Glycosyl hydrolase family 1 signature 412 420 IPR001360 GO:0004553|GO:0005975
Spst2g02404 517 PRINTS Glycosyl hydrolase family 1 signature 456 473 IPR001360 GO:0004553|GO:0005975
Spst2g02404 517 PRINTS Glycosyl hydrolase family 1 signature 435 446 IPR001360 GO:0004553|GO:0005975
Spst2g02404 517 Pfam Glycosyl hydrolase family 1 36 508 IPR001360 GO:0004553|GO:0005975
Spst2g02404 517 PANTHER GLYCOSYL HYDROLASE 38 511 IPR001360 GO:0004553|GO:0005975
Spst2g02404 517 SUPERFAMILY (Trans)glycosidases 28 508 IPR017853 -
Spst2g02404 517 FunFam Beta-glucosidase 12 25 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02404 Spst-Chr2 23705533 23709283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02404 8 507 Glycoside Hydrolase AT5G44640 54.291 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02404 K01188 - gmx:100820528 868.611