Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02403 ATGTCTGGTGTTGCTCTCACTCCAGAAATAGCTTTGTTGAATCGGAACAGTTTCCCACCTGGCTTCATCCTTGGTACAACATCCTCAGCGTATCAGTATGAAGGTGCAGCAAATGAAGGTGGTAGAGGACCAAGTATTTGGGATACCTTCACTCATAAATTTTCAGATAGGATTGAGGACAGAAACAATGGAGATGTTGCCGTTGATTCTTATCATCACTACAAGGTATTGCCGATTCAAAGTTTTTTCTTCTTATGTAGTTTATCAGTTGTCATTACTAATGAAAAGAAGATGTTGATTGTGAAGAATATGAATTTGGATGCTTACAGATTTTCCATATCTTGGTCTAGAATAGTTCCGAATGGAAAGCTAAGTGGAGGTATAAATCAAGAAGGAATACACAATTATAACAACCTTATCAATGAGCTAGTGGCGAATGGTTTACAACCATTTGTGACTCTTTTTCATTGGGATCTTCCTCAAGCTTTAGAAGATATATATGGTGGCTTTTTAAGTCCTCGCATTGTGAAAGATTTTCAGGACTATGCAGAGCTTTGCTTCAAGGAATTTGGAGATAGAGTAAAAAATTGGATAACTTTGAATGAGCCATGGAGTTTCAGCCACAAGGGTTATGCAACAGGGACAATGGGACCAGGTCGATGTTCTTCTTGGTCCAATCCTAATTGCTATGGTGGTGATTCTGGGACAGAACCCTATTTGGTCACGCATCACCAACTTCTTGCTCATGCAGCAGCTGTAAATTTGTACAAAACTAAGTACCAGCAGACATTTCAGAATGGTGTGATAGGCATAGCACTGTATTCTATTTGGTACGAGCCACTCTCGAAAAGCAAACTTGATCGAAAGGCTACTGAACGAGCTATTGACTTCTTGTTTGGATGGGTAATTGTGCCTGATGGAAAGCCTATTGGTTTAAATGTAGGTTGCTTCAGATTGGTTGTATGTTTATCCAAGAGGATTTCGTGA 987 0.3951 MSGVALTPEIALLNRNSFPPGFILGTTSSAYQYEGAANEGGRGPSIWDTFTHKFSDRIEDRNNGDVAVDSYHHYKVLPIQSFFFLCSLSVVITNEKKMLIVKNMNLDAYRFSISWSRIVPNGKLSGGINQEGIHNYNNLINELVANGLQPFVTLFHWDLPQALEDIYGGFLSPRIVKDFQDYAELCFKEFGDRVKNWITLNEPWSFSHKGYATGTMGPGRCSSWSNPNCYGGDSGTEPYLVTHHQLLAHAAAVNLYKTKYQQTFQNGVIGIALYSIWYEPLSKSKLDRKATERAIDFLFGWVIVPDGKPIGLNVGCFRLVVCLSKRIS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02403 328 PANTHER GLYCOSYL HYDROLASE 17 304 IPR001360 GO:0004553|GO:0005975
Spst2g02403 328 SUPERFAMILY (Trans)glycosidases 10 303 IPR017853 -
Spst2g02403 328 Gene3D Glycosidases 4 307 - -
Spst2g02403 328 Pfam Glycosyl hydrolase family 1 98 303 IPR001360 GO:0004553|GO:0005975
Spst2g02403 328 Pfam Glycosyl hydrolase family 1 15 75 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02403 Spst-Chr2 23694663 23697459 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02403 13 305 Glycoside Hydrolase AT5G42260 52.218 3.95e-108 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02403 K01188 - gmx:100792870 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02403 2 23694663 23697459 Spst2g02403 2 23694663 23697459 ECH