Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02398 ATGAACATGTTTCCGCTACTCTGCGTTTTTGTTACCTCATCCATCCTCACCCTCACTCGTTCCATGGCTGTTCCACCCATTCTTGACGTTTCTTCTCTCAACCGGAGCAGTTTCCCCAAAGGCTTTGTTTTCGGCACAGCCTCCGCTTCATACCAGTATGAAGGTGCTGCAATGGAAGATGGAAAAGGAACGAGTATATGGGATACTTTCACTCACAAATACCCAGAAAAAATTAAAGACCGAAGTACGGGAGATGTAGCGACAGACCAATATCATCGGTATAAGGAGGATATTGGAATCATGAAGAACATGAATTTGGATGCTTACAGATTCTCCATTTCTTGGCCAAGGGTATTACCGAAAGGAAAGCTTTCTGCAGGAGTAAACCAGGCAGGAATAGACTACTATAACAATCTCATCAACGAACTGCTGGAGAATGGTATGGAACCATATGTGACACTTTTTCATTGGGACGTTCCCCAAGCCTTGGAGGATGAGTATGGTGGATTTTTAAGCCCTAGCATTGTAGATGATTTTAAGGACTTTGCTGAACTCTGCTTCAAGGAATTTGGTGATAGGGTGAAATATTGGATTACTTTGAATGAACCGAGCACCGTGACCTGGAATGGCTATACAGTTGGATCGTATGCACCAGGTCGTTGTTCTGATTGGCAAAATCTGAACTGCACAGGTGGTGATTCAGGAACTGAGCCATATTTGGCTGCGCACTATCTACTTCTTTCCCATGCTGCTGCTGCCAACTTGTATAAGACCAAGTATCAGAAAGTTCAAAAGGGTTTGCTGGGCATTACCTTGAACAGTGACTGGTTTTTGCCGGCAAATGACAACATAACAGATCGAGAAGCTGCACGTAGAGCCCTTGACTTCAGGTTTGGATGGTATATGGATCCTCTCACAAAAGGTGAGTATCCAACAAGCATGCAACACTTGGTGGGAAACCGTCTACCAAGGTTCTCCAAAGAAGAAGCCAAACAACTCAAAGGGTCGTTTGATTTTCTGGGTCTAAACCACTATGCAACCGTTTATGCTGGTCATGCACCTCGTCTACGTGGTTCCAAACCATCCCTTCTAAATGATCCTCTTGTTTATACTACAAATGAACGTGACGGCCAGATTCTTTGTCCATATGCTGCATCTCGCTGGTTATGCGTTTATCCACGAGGAATACGACAACTGTTGCTTTACATCAAGAAGAATTACAACAATCCCTTAATTTACATTACTGAAAATGGTTATGATGAGTTCAACGATCCAACCCTATCACTTGAAGAAAAGCTTTTAGATACCATCAGAGTTGATTACTTATATCGTTATCTTTATTATGTTAAAATGGCAATCAGGGATGGTGTGAATGTGAAAGGATATTTTGTATGGTCATTTCTGGATAACATGGAGTGGAGCTCTGGCTATACTGTGCGATTTGGATTCATCTTTGTGGATTTTGAAAACGGTTTGAAAAGATACCCAAAACTCTCGGCACAATGGTTCAAGAACTTTCTCAGCAAGTCCTAA 1533 0.424 MNMFPLLCVFVTSSILTLTRSMAVPPILDVSSLNRSSFPKGFVFGTASASYQYEGAAMEDGKGTSIWDTFTHKYPEKIKDRSTGDVATDQYHRYKEDIGIMKNMNLDAYRFSISWPRVLPKGKLSAGVNQAGIDYYNNLINELLENGMEPYVTLFHWDVPQALEDEYGGFLSPSIVDDFKDFAELCFKEFGDRVKYWITLNEPSTVTWNGYTVGSYAPGRCSDWQNLNCTGGDSGTEPYLAAHYLLLSHAAAANLYKTKYQKVQKGLLGITLNSDWFLPANDNITDREAARRALDFRFGWYMDPLTKGEYPTSMQHLVGNRLPRFSKEEAKQLKGSFDFLGLNHYATVYAGHAPRLRGSKPSLLNDPLVYTTNERDGQILCPYAASRWLCVYPRGIRQLLLYIKKNYNNPLIYITENGYDEFNDPTLSLEEKLLDTIRVDYLYRYLYYVKMAIRDGVNVKGYFVWSFLDNMEWSSGYTVRFGFIFVDFENGLKRYPKLSAQWFKNFLSKS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02398 510 SUPERFAMILY (Trans)glycosidases 24 508 IPR017853 -
Spst2g02398 510 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 42 56 IPR033132 -
Spst2g02398 510 FunFam Beta-glucosidase 12 26 509 - -
Spst2g02398 510 PANTHER GLYCOSYL HYDROLASE 37 509 IPR001360 GO:0004553|GO:0005975
Spst2g02398 510 Pfam Glycosyl hydrolase family 1 36 509 IPR001360 GO:0004553|GO:0005975
Spst2g02398 510 PRINTS Glycosyl hydrolase family 1 signature 480 492 IPR001360 GO:0004553|GO:0005975
Spst2g02398 510 PRINTS Glycosyl hydrolase family 1 signature 456 473 IPR001360 GO:0004553|GO:0005975
Spst2g02398 510 PRINTS Glycosyl hydrolase family 1 signature 412 420 IPR001360 GO:0004553|GO:0005975
Spst2g02398 510 PRINTS Glycosyl hydrolase family 1 signature 435 446 IPR001360 GO:0004553|GO:0005975
Spst2g02398 510 PRINTS Glycosyl hydrolase family 1 signature 336 350 IPR001360 GO:0004553|GO:0005975
Spst2g02398 510 Gene3D Glycosidases 22 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02398 Spst-Chr2 23655839 23661046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02398 6 509 Glycoside Hydrolase AT5G44640 51.683 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02398 K01188 - vum:124848827 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02398 2 23655839 23661046 Spst2g02398 2 23655839 23661046 ECH