Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02397 ATGGCGTCGCGGGTCCACGCTACTACCGGCCAAACTGGAACGCGGAAAGAGAAGATGGGATGGGCATCGGAGAGCCTTTTTAGGTTGCTTTTCGCGGGTATGGTATTTAACGGCTATCAATATCTTGTCGTTGGAGTCTTCACTCTTGTTATAAGCTTCCCTGTTGCAATCACGCATGCTGTTGCACCTTCTCTGGATGTTTCGTCTTTGAACCGGACCAGTTTTCCCTCAGGTTTCATCTTTGGCACTGCCTCCTCAGCCTACCAGTATGAAGGTGCTGCAAATGAAGGAGGTAGAGGACCAAGTATATGGGATACCATTACTCATAAATATCCAGAAATGATATTGGATAGAAGCAACGGAGATGTAGCTGTTGATCAATATCATCGCTATAAGGAAGATGTTGGGATCATGAAGTATATGAACACTGATGCCTACAGATTCTCCATCTCGTGGTCAAGGATATTACCAAATCTTCTGCCATTTGTGACCCTTTTCCATTGGGATCTTCCCCAAGCCTTAGAAGATGAATACGGTGGCTTCTCAAGTCCTCATATTATAAATGATTTCCAGGACTACGCAGAGCTATGCTTCAAGGAATTTGGAGATAGAGTGAAATATTGGACTACTTTTAATGAGCCATGGAGTTACAGTATGGGCTCAGAACCCTACACGACCTCACACTACCAACTGCTTGCTCATGCAGCAGCTGTCAAAATTTATAAAACCAATTATCAGGCACCTCAAAATGGTTTGATAGGCATCACCTTAAATTGTCACTGGTTTATTCCGTTCTCAAATGACAAATTAGATCATCAAGCTGCCCAACGAGCTCTTGATTTCATGTTGGGATGGTTTATGCAACCACTTACAAGAGGAAAATATCCAAAAAGCATGCAGTCTTTGCTGGGAAGCCGATTACCAAACATCACTAAAGAGCAATCAAAGCTACTTGTTGGCTCGTTTGATTTTGCCAGTTCATCTTGGCTTTATGTTTATCCAAGAGGACTTCGAGAACTATTGTTGTACATCAAGATAAAGTATAACAGCCCTGTAATTTACATAACAGAAAATGGTATGGACGAGCACAATGATCCAAAACTATCACTCGAAGAGTCACTCATGGATACTTATAGAATTGACTACTTCTATCGCCATCTTTATTATATTTTAATTGCAATCAAGGATGGGGTGAAAGTACATGGATATTTTGCATGGTCGCTTCTGGACAACTTCGAATGGACTTCTGGCTACACCATGCGTTTTGGAATTAACTTCATCGATTACAAGGACAATTTGAAAAGACACCAAAAGCTCTCTGCTCATTGGTTCAGGAATTTTCTTAATAAAGATGGACTCGTTCCATGA 1368 0.4145 MASRVHATTGQTGTRKEKMGWASESLFRLLFAGMVFNGYQYLVVGVFTLVISFPVAITHAVAPSLDVSSLNRTSFPSGFIFGTASSAYQYEGAANEGGRGPSIWDTITHKYPEMILDRSNGDVAVDQYHRYKEDVGIMKYMNTDAYRFSISWSRILPNLLPFVTLFHWDLPQALEDEYGGFSSPHIINDFQDYAELCFKEFGDRVKYWTTFNEPWSYSMGSEPYTTSHYQLLAHAAAVKIYKTNYQAPQNGLIGITLNCHWFIPFSNDKLDHQAAQRALDFMLGWFMQPLTRGKYPKSMQSLLGSRLPNITKEQSKLLVGSFDFASSSWLYVYPRGLRELLLYIKIKYNSPVIYITENGMDEHNDPKLSLEESLMDTYRIDYFYRHLYYILIAIKDGVKVHGYFAWSLLDNFEWTSGYTMRFGINFIDYKDNLKRHQKLSAHWFRNFLNKDGLVP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02397 455 Gene3D Glycosidases 55 325 - -
Spst2g02397 455 Gene3D Glycosidases 326 450 - -
Spst2g02397 455 PANTHER GLYCOSYL HYDROLASE 160 325 IPR001360 GO:0004553|GO:0005975
Spst2g02397 455 Pfam Glycosyl hydrolase family 1 327 452 IPR001360 GO:0004553|GO:0005975
Spst2g02397 455 Pfam Glycosyl hydrolase family 1 73 158 IPR001360 GO:0004553|GO:0005975
Spst2g02397 455 Pfam Glycosyl hydrolase family 1 159 326 IPR001360 GO:0004553|GO:0005975
Spst2g02397 455 SUPERFAMILY (Trans)glycosidases 63 449 IPR017853 -
Spst2g02397 455 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 79 93 IPR033132 -
Spst2g02397 455 PRINTS Glycosyl hydrolase family 1 signature 353 361 IPR001360 GO:0004553|GO:0005975
Spst2g02397 455 PRINTS Glycosyl hydrolase family 1 signature 397 414 IPR001360 GO:0004553|GO:0005975
Spst2g02397 455 PRINTS Glycosyl hydrolase family 1 signature 376 387 IPR001360 GO:0004553|GO:0005975
Spst2g02397 455 PRINTS Glycosyl hydrolase family 1 signature 421 433 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02397 Spst-Chr2 23638694 23643127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02397 67 449 Glycoside Hydrolase AT1G26560 45.417 4.89e-141 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02397 K01188 - gmx:100785608 729.169