Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02396 ATGATAAAACCTCATCTGTATCAATCACAAACTCCTAACCAAACCCTATTGTTTCTGCAACGTCCACTCTGTAATTCTATTGGAAGCAGTGGAAGAAGAACTTCATCTCTTTCACCATGGTTAAAGGACAACGTGCAGAGCCAAAAACAGCTTCTACTGGCTGCACGCAACGTTGAAGCAAATTCTAGTAATCCAGCAAGAACAACAACAACAACAAGCACAAGCAGAGACAGAGATGAGAAGAGTAGAGTGAAGGTTAAAGCCATAGTTAAGGTCAAAATAACTGCTGCTGGTTTCTTTTCCAGTCTCAGGTTGGACCGAGGAATCGACGATATAACAGATTTGCTTGGTAAATCTCTTCTCTTGGAGCTTGTTAGCTCTGAGCTTGATCCTGGTAACGATAAGTTGAAGTCGTTCTGTGTCTGCGAACCTTTAATGGCATGGCCAGTGACTGGACTAGAGAAGGAAACGCTGAAAGCATACGCACACAAAGCAGGAAATGGAGAGGAATCGTATGAGTACGAAGCTGAATTTGATGTTCCAAAAGATTTTGGGGAGATCGGTGCTGTTCTGGTCGAGAATGAGCATCACAAAGAGATGTTCCTTGAAACCATCATCCTTGATGGCTTCCCCGAAGACCCTCCTATTCATTTTCACTGTGCCTCTTGGGTTCACTCCAAGTTCGATAATCCCATCAATAGGGTCTTCTTCTCCAACAAGTGTTACTTACCGAGAGAGACACCGAGTGGTTTAAGAAGACTAAGAGCAGAAGAACTGAGAAACCTACGAGGGAATGGAGAAGGAGAAAGGAAAAGCTTTGAAAGAATATATGATTATGATAAATACAATGACATTGGAGATCCTGATAAAAGCCTTGAACTTCAGAGACCTCCTTTGGGAGGTAAAGAACGACCGTATCCTAGACGTTGTCGAACTGGTCGGCCACATAGTGAAGCAGATCCATTGTCAGAAAAAAAAAGTGGAAAGTTTTACGTTCCGAGGGACGAATGCTTCTCAGAAGTGAAGCAGTTGACGTTTTCAACCAAGACCTTACACTCAGTGTTGCTAATACTGCTTCCATCTCTGGGGAAGATTATCAAAGAAAAGGATCTTCCATTTTCGTACTTCCACGACATTGATTCACTCTTCAGCCATGGACTTGACTTACCTCCTGAGCATGAGACTGAGAAGGGGTTCCTAGGAAAAATGATGCCAAGACTCGTCAAATCCTTTTCTGGCGAGAGGGGAAACGTGCTTCGGTTTGAGACACCAGAGACTATGAGCAGGGACAGGTTTTTCTGGTTCAGGGATGAGGAATTTGCTAGACAAACTGTTGCTGGTCTCAACCCTTATAGCATAAAATTGGTCACAGAATGGCCATTGAGGAGTAAACTTGACCCAGAAATATATGGTCCAGCAGAATCAGCAATCACTTCAGAAATTATCAATAAAGAGATTGGAGGCATAATGTCTGTAGAAAACGCTATCAAAGAAAAGAAGCTATTCATGTTAGATTACCATGACATACTTTTACCGTATGTCAGCAAAGTACGCAAACTGAAGGGGAAAACACTGTATGGATCACGAACTTTGTTCTTTCTAAACCCAGAGGGGACACTGAGGCCTCTTGCCATTGAGCTTACTCGGCCAGAAATAAAGGGACAAAAGCAATGGAAGCAAGTTTTCACGCCTTCTTGGCACTCAACTAGTGTTTGGCTCTGGAGGTTTGCCAAGGCTCATGTTCTTGCACATGACTCTGGCTATCACCAACTTGTTAGTCATTGGTTAAGAACTCACTGTGTGACAGAGCCCTATGTTATTGCAACCAACAGACAACTTAGTGAGATGCATCCCATATATAAACTGCTACACCCTCATTTCCGTTACACAATGGAGATTAATGCCCTGGCACGGGAAGCACTTATTAACGCTGATGGGACAATTGAGAGCTCATTCGCACCAGGAAAGTATTCCATAGAGATTAGTTCCGCTGCTTATGATCTTGAATGGCGGTTTGACATGCAGTCTCTACCTGCGGATCTAATTAGAAGGGGAATGGCTTTGGAAGATCCATTTTCTCCACATGGCTTAAAGCTTACCATTCCAGACTATCCTTTTGCCAATGATGGGTTGCTTCTGTGGGACGCCATAAAGCTATGGGTGACCGACTATGTCAACCATTATTACCCTGAACCAAGTCTTGTGAAGTCAGATGAAGAGCTGCAGGCATGGTGGAAAGAGATTAGAACAGCTGGTCATGCTGACAAAAAAGATGAGCCATGGTGGCCAGTTCTCAAAACCCCAAGAGACCTCATTGGAATCCTCAGCACAATCATTTGGGTAACTTCTGGTCACCATGCAGCAGTGAACTTTGGGCAATATGTTTATGGGGGATATTTCCCAAATAGGCCTACAATTACAAGGACTAAAATGCCCACAGAGGACCCTTCAGAAGATGAGTGGAAAAAGTTCATTGCAAAACCTGAAAAAGCTCTTCTCAAGTGCTTCCCTTCACAACTTCAAGCAACTAGAGTCATGGCTGTCTTGGATATACTTTCAACTCATTCACCTGATGAGGAATACATAGGAGAAAAGATGGAACCATCATGGGGTGAAGACCCCGTCATAAAGAATGCCTTTGAAAGATTTAGAGAAAGACTGAAGAAACTAGAATCAGTGATTGATGAGAGGAATGAAAATACGAAACTAATGAACAGAAATGGAGCTGGCATTGTCCCATACGAGCTGTTGAAACCTTTCTCAAAGCCAGGTGTGACTGGAATGGGGGTTCCCTGCAGTATATCTATTTAA 2811 0.4319 MIKPHLYQSQTPNQTLLFLQRPLCNSIGSSGRRTSSLSPWLKDNVQSQKQLLLAARNVEANSSNPARTTTTTSTSRDRDEKSRVKVKAIVKVKITAAGFFSSLRLDRGIDDITDLLGKSLLLELVSSELDPGNDKLKSFCVCEPLMAWPVTGLEKETLKAYAHKAGNGEESYEYEAEFDVPKDFGEIGAVLVENEHHKEMFLETIILDGFPEDPPIHFHCASWVHSKFDNPINRVFFSNKCYLPRETPSGLRRLRAEELRNLRGNGEGERKSFERIYDYDKYNDIGDPDKSLELQRPPLGGKERPYPRRCRTGRPHSEADPLSEKKSGKFYVPRDECFSEVKQLTFSTKTLHSVLLILLPSLGKIIKEKDLPFSYFHDIDSLFSHGLDLPPEHETEKGFLGKMMPRLVKSFSGERGNVLRFETPETMSRDRFFWFRDEEFARQTVAGLNPYSIKLVTEWPLRSKLDPEIYGPAESAITSEIINKEIGGIMSVENAIKEKKLFMLDYHDILLPYVSKVRKLKGKTLYGSRTLFFLNPEGTLRPLAIELTRPEIKGQKQWKQVFTPSWHSTSVWLWRFAKAHVLAHDSGYHQLVSHWLRTHCVTEPYVIATNRQLSEMHPIYKLLHPHFRYTMEINALAREALINADGTIESSFAPGKYSIEISSAAYDLEWRFDMQSLPADLIRRGMALEDPFSPHGLKLTIPDYPFANDGLLLWDAIKLWVTDYVNHYYPEPSLVKSDEELQAWWKEIRTAGHADKKDEPWWPVLKTPRDLIGILSTIIWVTSGHHAAVNFGQYVYGGYFPNRPTITRTKMPTEDPSEDEWKKFIAKPEKALLKCFPSQLQATRVMAVLDILSTHSPDEEYIGEKMEPSWGEDPVIKNAFERFRERLKKLESVIDERNENTKLMNRNGAGIVPYELLKPFSKPGVTGMGVPCSISI 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02396 936 Gene3D - 586 934 - -
Spst2g02396 936 MobiDBLite consensus disorder prediction 302 325 - -
Spst2g02396 936 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 241 936 IPR013819 GO:0016702|GO:0046872
Spst2g02396 936 ProSitePatterns Lipoxygenases iron-binding region signature 2. 616 626 IPR020834 GO:0016702|GO:0046872
Spst2g02396 936 Gene3D - 361 450 IPR027433 -
Spst2g02396 936 ProSitePatterns Lipoxygenases iron-binding region signature 1. 589 603 IPR020833 GO:0016702|GO:0046872
Spst2g02396 936 PANTHER LIPOXYGENASE 85 936 IPR000907 GO:0016702|GO:0034440|GO:0046872
Spst2g02396 936 MobiDBLite consensus disorder prediction 57 80 - -
Spst2g02396 936 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 85 242 IPR036392 GO:0005515
Spst2g02396 936 SMART LH2_4 88 239 IPR001024 GO:0005515
Spst2g02396 936 Pfam Lipoxygenase 250 919 IPR013819 GO:0016702|GO:0046872
Spst2g02396 936 Coils Coil 880 900 - -
Spst2g02396 936 PRINTS Plant lipoxygenase signature 273 289 IPR001246 GO:0016491
Spst2g02396 936 PRINTS Plant lipoxygenase signature 305 324 IPR001246 GO:0016491
Spst2g02396 936 PRINTS Plant lipoxygenase signature 526 550 IPR001246 GO:0016491
Spst2g02396 936 PRINTS Plant lipoxygenase signature 234 255 IPR001246 GO:0016491
Spst2g02396 936 PRINTS Plant lipoxygenase signature 208 226 IPR001246 GO:0016491
Spst2g02396 936 PRINTS Plant lipoxygenase signature 370 391 IPR001246 GO:0016491
Spst2g02396 936 PRINTS Plant lipoxygenase signature 458 477 IPR001246 GO:0016491
Spst2g02396 936 PRINTS Plant lipoxygenase signature 849 863 IPR001246 GO:0016491
Spst2g02396 936 PRINTS Plant lipoxygenase signature 419 435 IPR001246 GO:0016491
Spst2g02396 936 PRINTS Lipoxygenase signature 571 588 IPR013819 GO:0016702|GO:0046872
Spst2g02396 936 PRINTS Lipoxygenase signature 609 629 IPR013819 GO:0016702|GO:0046872
Spst2g02396 936 PRINTS Lipoxygenase signature 589 606 IPR013819 GO:0016702|GO:0046872
Spst2g02396 936 Pfam PLAT/LH2 domain 173 237 IPR001024 GO:0005515
Spst2g02396 936 FunFam Lipoxygenase 451 585 - -
Spst2g02396 936 Gene3D PLAT/LH2 domain 84 260 - -
Spst2g02396 936 Gene3D - 452 585 - -
Spst2g02396 936 MobiDBLite consensus disorder prediction 57 72 - -
Spst2g02396 936 MobiDBLite consensus disorder prediction 287 325 - -
Spst2g02396 936 SUPERFAMILY Lipoxigenase 243 936 IPR036226 -
Spst2g02396 936 Gene3D - 261 358 - -
Spst2g02396 936 FunFam Lipoxygenase 568 935 - -
Spst2g02396 936 ProSiteProfiles PLAT domain profile. 99 238 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02396 Spst-Chr2 23631548 23638364 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02396 180 936 Acyl Lipid Metabolism Gene Families AT3G45140 59.658 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02396 K00454 - gmx:100797626 1567.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02396 2 23631548 23638364 Spst2g02396 2 23631548 23638364 ECH