Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02339 ATGACAGCACTCGTCACTGGTGGTTCCAAAGGAATCGGATATGCTATCGTGGAGGAGTTGGCACAATTTGGGGCCATTGTACACACTTGTGCTCGAAACGAAGCTGAACTCAGTGAATCCTTAAACGAATGGAGCATAAAAGGATACAGAGTGACCGGTTCGGTCTGTGACCTTGCGTCTCGTGTAGACAGAGAAGAGCTCATAGCTAGAATCTCCTCTCAGTTTAATGGCAAACTCAACATCCTTGTTAACAACGTGGGAACAAACATTCAGAAACAGACCCTGGATTTCACAGAGGAAGATTTTTCAGCTCTGATCAAAACGAATCTTGAATCTTGTTTCCACTTAAGCCAGCTTGCATATCCTCTCCTAAAAGCTGCAGAAGCTGCAAGTATCATTTTCATATCCTCAGTTGCTGGAATGGTAGCTACAAATTTAGCATCCGTTGTATATGGTGCAACAAAAGGAGCAATAAACCAAGTGACAAAATATTTGGCATGCGAATGGGCCAAAGACAATATAAGGACTAATTGTGTTGCACCTGGGCCAATTAGAACCCCTCTTGGTGACAAGCACTTTAAAGAGGAAAAAATTCATAATGCTGTGACTGCACAAGCCCCTCTTGGACGGGTCGGAGAGGCAGAGGAGGTGTCTTCGTTGGTGGCATTCCTCTGCTTGCCTGCAGCCTCTTACATTACAGGACAGACCATTTGTGTTGATGGTGGCTTCTCTGTGAATGGCCTCTATATAAACTAG 756 0.4458 MTALVTGGSKGIGYAIVEELAQFGAIVHTCARNEAELSESLNEWSIKGYRVTGSVCDLASRVDREELIARISSQFNGKLNILVNNVGTNIQKQTLDFTEEDFSALIKTNLESCFHLSQLAYPLLKAAEAASIIFISSVAGMVATNLASVVYGATKGAINQVTKYLACEWAKDNIRTNCVAPGPIRTPLGDKHFKEEKIHNAVTAQAPLGRVGEAEEVSSLVAFLCLPAASYITGQTICVDGGFSVNGLYIN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02339 251 Pfam Enoyl-(Acyl carrier protein) reductase 9 244 - -
Spst2g02339 251 PRINTS Glucose/ribitol dehydrogenase family signature 207 227 IPR002347 -
Spst2g02339 251 PRINTS Glucose/ribitol dehydrogenase family signature 2 19 IPR002347 -
Spst2g02339 251 PRINTS Glucose/ribitol dehydrogenase family signature 77 88 IPR002347 -
Spst2g02339 251 PRINTS Glucose/ribitol dehydrogenase family signature 124 140 IPR002347 -
Spst2g02339 251 PRINTS Glucose/ribitol dehydrogenase family signature 172 189 IPR002347 -
Spst2g02339 251 PRINTS Glucose/ribitol dehydrogenase family signature 151 170 IPR002347 -
Spst2g02339 251 PANTHER TROPINONE REDUCTASE 1 247 IPR045000 GO:0016491
Spst2g02339 251 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 245 IPR036291 -
Spst2g02339 251 FunFam Short-chain dehydrogenase reductase 1 247 - -
Spst2g02339 251 Gene3D - 1 251 - -
Spst2g02339 251 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 IPR002347 -
Spst2g02339 251 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 IPR002347 -
Spst2g02339 251 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02339 Spst-Chr2 22921149 22922417 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02339 1 248 Miscellaneous Gene Families AT2G29150 64.113 5.69e-113 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02339 K08081 - gmx:100785449 427.557