Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02338 ATGGGTGAAACAAACCATGTTAGCAAAAGCAGCAGGTGGTGTTTGCAGGGGATGACAGCACTCGTCACTGGTGGTTCCAAAGGAATCGGATATGCTATCGTGGAGGAGTTGGCACAATTTGGGGCCATTGTACACACTTGTGCTCGAAACGAAGCTGAACTCAGTGAATCCTTAAACGAATGGAGCATAAAAGGATACAGAGTGACCGGTTCGGTCTGTGACCTTGCGTCTCGTGTAGACAGAGAAGAGCTCATAGCTAGAATCTCCTCTCAGTTTAATGGCAAACTCAACATCCTTGTTAACAACGTGGGAACAAACATTCAGAAACAGACCCTGGATTTCACAGAGGAAGATTTTTCAGCTCTGATCAAAACGAATCTTGAATCTTGTTTCCACTTAAGCCAGCTTGCATATCCTCTCCTAAAAGCTGCAGAAGCTGCAAGTATCATTTTCATATCCTCAGTTGCTGGAATGGTAGCTACAAATTTAGCATCCGTTGTATATGGTGCAACAAAAGGAGCAATAAACCAAGTGACAAAATATTTGGCATGCGAATGGGCCAAAGACAATATAAGGACTAATTGTGTTGCACCTGGGCCAATTAGAACCCCTCTTGGTGACAAGCACTTTAAAGAGGAAAAAATTCATAATGCTGTGACTGCACAAGCCCCTCTTGGACGGGTCGGAGAGGCAGAGGAGGTGTCTTCGTTGGTGGCATTCCTCTGCTTGCCTGCAGCCTCTTACATTACAGGACAGACCATTTGTGTTGATGGTGGCTTCTCTGTGAATGGCCTCTATATAAACTAG 807 0.4486 MGETNHVSKSSRWCLQGMTALVTGGSKGIGYAIVEELAQFGAIVHTCARNEAELSESLNEWSIKGYRVTGSVCDLASRVDREELIARISSQFNGKLNILVNNVGTNIQKQTLDFTEEDFSALIKTNLESCFHLSQLAYPLLKAAEAASIIFISSVAGMVATNLASVVYGATKGAINQVTKYLACEWAKDNIRTNCVAPGPIRTPLGDKHFKEEKIHNAVTAQAPLGRVGEAEEVSSLVAFLCLPAASYITGQTICVDGGFSVNGLYIN 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02338 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Spst2g02338 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 IPR002347 -
Spst2g02338 268 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 IPR002347 -
Spst2g02338 268 Pfam Enoyl-(Acyl carrier protein) reductase 26 261 - -
Spst2g02338 268 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 262 IPR036291 -
Spst2g02338 268 PANTHER TROPINONE REDUCTASE 12 264 IPR045000 GO:0016491
Spst2g02338 268 Gene3D - 2 265 - -
Spst2g02338 268 FunFam Short-chain dehydrogenase reductase 6 264 - -
Spst2g02338 268 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Spst2g02338 268 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Spst2g02338 268 PRINTS Glucose/ribitol dehydrogenase family signature 94 105 IPR002347 -
Spst2g02338 268 PRINTS Glucose/ribitol dehydrogenase family signature 141 157 IPR002347 -
Spst2g02338 268 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Spst2g02338 268 PRINTS Glucose/ribitol dehydrogenase family signature 224 244 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02338 Spst-Chr2 22874344 22875662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02338 11 265 Miscellaneous Gene Families AT2G29150 64.314 2.47e-117 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02338 K08081 - gmx:100785449 448.358