Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02290 ATGTCTTCTTCTTCACTGTTTCTATCCACTTTCTTCATCCTCACTGTCACCACCCTCACCTCACCGACGTGTGGACTTATCCTAACCCTCGTTAACAACTGCAACTACACCGTGTGGCCCGCTATTCAGCCCAACGCCGGCCACCCTGTCCTGGCTGGCGGCGGCTTCACCCTCCATACCCTCACCCACCTCTCCATCCCGGTCCCCGACGCCCATTGGTCGGGCCGGGTCTGGGCCCGCACTGGCTGCACCTACTCCGGCACCGCCTTCTCCTGCGCCAGCGGAGACTGCGGCGGCCGCCTCCAGTGTAACGGTGCCGGCGGTGCTGCCCCCGCCACTCTGGCGCAGTTGGAGGCCCACCACGGTAACGGCGACTACGTCTCCTACAGCGTGAGCCTCGTGGACGGTTTTAACGTTCCCATGACTGTGACCCCGCACGAGGGCAAAGGCGTGTGCCCCGTGGTGGGTTGCCGCACCGACTTGCTTGCCACCTGTCCCTCCGTACTGCAGCACCGTGTGCCCGCCGTTCACGGACCCGTCGTCGCGTGCAAGAGCGGGTGCGAGGCTTTCCATACGGACGAGCTCTGCTGTAGGAACCACTTCAACAGCCCCAACACGTGCCATGAGTCAGTGTACTCATCCTTCTTCAAGCACTCGTGCCCTAACACTTTCACCTTTGCGCATGACAACCCCTCCCTCATGCACCAGTGTTCCTCCCCGCATGAGCTAAAGGTTATCTTTTGCCACTGA 750 0.616 MSSSSLFLSTFFILTVTTLTSPTCGLILTLVNNCNYTVWPAIQPNAGHPVLAGGGFTLHTLTHLSIPVPDAHWSGRVWARTGCTYSGTAFSCASGDCGGRLQCNGAGGAAPATLAQLEAHHGNGDYVSYSVSLVDGFNVPMTVTPHEGKGVCPVVGCRTDLLATCPSVLQHRVPAVHGPVVACKSGCEAFHTDELCCRNHFNSPNTCHESVYSSFFKHSCPNTFTFAHDNPSLMHQCSSPHELKVIFCH 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02290 249 PANTHER OS03G0233200 PROTEIN 13 248 IPR001938 -
Spst2g02290 249 SMART tha2 28 249 IPR001938 -
Spst2g02290 249 ProSiteProfiles Thaumatin family profile. 27 249 IPR001938 -
Spst2g02290 249 Pfam Thaumatin family 32 248 IPR001938 -
Spst2g02290 249 CDD TLP-PA 27 248 - -
Spst2g02290 249 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Spst2g02290 249 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Spst2g02290 249 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Spst2g02290 249 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Spst2g02290 249 Gene3D Thaumatin 27 248 IPR037176 -
Spst2g02290 249 FunFam Osmotin-like protein 27 248 - -
Spst2g02290 249 SUPERFAMILY Osmotin, thaumatin-like protein 27 248 IPR037176 -
Spst2g02290 249 PIRSF PR5 1 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02290 Spst-Chr2 22088130 22088879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02290 8 248 Receptor kinase-like Gene Family AT5G38280 36.179 7.65e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02290 - - gmx:100818233 460.299